Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_032682.1 Length=1724 Score E Sequences producing significant alignments: (Bits) Value seq10842 125 8e-26 >seq10842 Length=63521 Score = 125 bits (138), Expect = 8e-26 Identities = 141/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 920 TGTTATCCATATACGCTTGCTGTTGAAAACCTCGTACGAGCCTTTGACAGGTACTCGGTA 979 ||||||||| || | ||| |||||| |||||||| |||||||| | ||| |||||||| Sbjct 55735 TGTTATCCAGATTCTTTTGGAGTTGAACACCTCGTAAGAGCCTTTAATAGGAACTCGGTA 55676 Query 980 GGGATATCTGTCGGTTATTTTTAGTAGTTCGTCAAGTTCAAGCCATCCGTAGAAATCATC 1039 ||| |||| || | || || || ||||||||| | |||||| || ||| |||||| Sbjct 55675 GGGGTATCGGTTCATGATCTTGAGAAGTTCGTCATACTTAAGCCACCCATAGTGATCATC 55616 Query 1040 GATAATAACATTTTCTTGTTGTTTGTAGCCATCCCACCAGTTACCACGAGCCTTGTAGAA 1099 |||||| || || ||| || | ||||| |||||||||| || | | ||||||| | Sbjct 55615 GATAATGACGTTGGGTTGCTGAATATAGCCGTCCCACCAGTCTCCTCTCGGCTTGTAGTA 55556 Query 1100 AATAGGTTC 1108 || | ||| Sbjct 55555 GATGGATTC 55547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5407245492740