Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= NC_021862.1 Length=8576 Score E Sequences producing significant alignments: (Bits) Value seq390013 118 6e-23 >seq390013 Length=546 Score = 118 bits (130), Expect = 6e-23 Identities = 194/270 (72%), Gaps = 15/270 (6%) Strand=Plus/Minus Query 7231 GCGAATTGCCGATACAACGGCACGTCGTACAGCGCCTCTTCCATCGCCACGTCCGTCAGC 7290 ||||| | ||| ||| |||| ||||| ||||||||||||||||||| ||| ||||| Sbjct 526 GCGAACTCGCGAAACACGGGCATGTCGTGCAGCGCCTCTTCCATCGCCGGGTCGCTCAGC 467 Query 7291 CCGAACCATTGCTGCA-GAAAGTGGATGCGCAGCATCGTTTCGACTGGAAACGGCTTCCG 7349 ||||||| ||||| | | | || | ||||||||||| |||| | ||||||| ||| Sbjct 466 GCGAACCACTGCTGGACGGTAATGAACCCGCAGCATCGTCTCGATGGCAAACGGCGGCCG 407 Query 7350 ACCCG---TCGCCTTGACCGGCGCA-TGCGGCGCTATCAACGCCAAAAAACGCCTGCCAC 7405 |||| ||||||| || | | | || | | ||| | || | |||| |||| Sbjct 406 GCCCGTCTTCGCCTTCACGGTAGTACGGCTTCACGATCTGCACC----AGCGCCGACCAC 351 Query 7406 GGCACCACACGTTCCATCTCAT-CCAGAAATACCTGCTTGCGCGTGCGTC--GGTTGCTC 7462 || ||||| || |||||||| | |||||| | || |||||||||| | || || | | Sbjct 350 GGAACCACGCGCTCCATCTCCTCCCAGAACT-CCCGCTTGCGCGT-CTTCTTAGTCG-AC 294 Query 7463 AGGTCCAGGCCAAGGTCGCTTTGTTTCATG 7492 |||| |||||| || || ||| |||||| Sbjct 293 AGGTTCAGGCCCAGTCCGAGTTGCTTCATG 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27132138891760