Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_021862.1 Length=8576 Score E Sequences producing significant alignments: (Bits) Value seq1306 156 2e-34 seq221 136 2e-28 >seq1306 Length=1223 Score = 156 bits (172), Expect = 2e-34 Identities = 159/205 (78%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 6903 ACGTTGGCGGCCGTGCCCACTACGGTGTGCACCAGCCCCGAGTCCGCATCCACACCAATG 6962 ||||| |||||||| || |||||| |||||||||||||||| || || ||||||||| Sbjct 528 ACGTTAGCGGCCGTCCCTACTACGCTGTGCACCAGCCCCGACGTGGCGTCTACACCAATG 587 Query 6963 TGCGCTTTCATGCCGAAATGCCACTGGTTACCTTTCTTGGTCTGGTGCATCTCTGGGTCA 7022 || || ||||| || || ||||| || || |||||| ||| ||| |||||||| || ||| Sbjct 588 TGGGCCTTCATCCCAAAGTGCCATTGATTGCCTTTCCTGGCCTGATGCATCTCAGGATCA 647 Query 7023 CGCTTGCCGCTGCCATTCTTGGTCGAACTGGGCGCGGCAATCAGCGAGGCGTCGACCACC 7082 |||||||| | |||||| ||| |||||||| ||||| | |||||||| | Sbjct 648 CGCTTGCCTTCTCGGTTCTTGACCGAGGGCGGCGCGGCGATCAGGGTAGCGTCGACGATA 707 Query 7083 GTGCACGTCTTTGAGCAGGTAGCCC 7107 |||| | || ||||||| ||||||| Sbjct 708 GTGC-CTTCCTTGAGCA-GTAGCCC 730 >seq221 Length=1203 Score = 136 bits (150), Expect = 2e-28 Identities = 358/540 (66%), Gaps = 25/540 (5%) Strand=Plus/Minus Query 6559 CATCCACAGATTGCTCAGGGCAAACAGCGTGTGTAATTGCTGTGTGTTCTTTATCAAGCC 6618 ||||||||| || |||||| |||| ||| | ||| |||||||| |||||| Sbjct 1008 CATCCACAGGTTTGACAGGGCGAACAACGTCACCATCTGCGCGGTGTTCTTGGCCAAGCC 949 Query 6619 TCGATAGCGCACCCTCAAGTGCCCAAACTGGCGCTTGATGACTCGGAACGGATGTTCCAC 6678 ||| ||||||| | | ||||||||||| |||||||| || |||||||| || || Sbjct 948 CCGAAAGCGCACTTTTTCATAGCCAAACTGGCGTTTGATGACCCGAAACGGATGCTCGAC 889 Query 6679 GCGGGCACGAATGCGCGCCTTGACCCGCTCCA----GCTCATCGACGAGCGCACCCGACA 6734 ||| |||| | |||||| || ||| | || |||| | | || || Sbjct 888 CTTGGCGCGAACCTGGGCCTTGGCCTTCTCGATTTTGCGGATCGCCTTGTACAAAACACT 829 Query 6735 -------CGGTGCTCTTGTCCAAGGCGCGGCGTTTGCCCGGGCGTAATGCCACATGCCAA 6787 | ||||| || | ||| || ||| |||||| || | |||||| Sbjct 828 GCGTTTTCCGTGCTTTT-TGTAAGT-GCTGCGG-----CGGGCG----GCAATCTGCCAA 780 Query 6788 CGCACCTTCAACTCCTGCACCT-CTTCGCGCTTGTCGATGCCCTGATAGCCGGCATCGCC 6846 ||||| | || ||| | |||||||||| || | || || || || ||| | Sbjct 779 ATGACCTTGCGC-CCAGCATGTTCTTCGCGCTTCTCAACCCCGGTGTAACCTGCGTCGGC 721 Query 6847 GAACACGTCGGCCTCCTTGCCATGCACCAATGCGTTGCGCTGGCGTCACGTCGTTGACGT 6906 | | || || |||| ||| |||| || | | ||| ||| ||||| || | Sbjct 720 GCAGACTACGTTTTCCTCGCCGTGCAGCAGTTTGGCAACCTG-CGTGACGTCTGCCACAT 662 Query 6907 TGGCGGCCGTGCCCACTACGGTGTGCACCAGCCCCGAGTCCGCATCCACACCAATGTGCG 6966 |||| || || | || ||| |||||||||| || || || | || | || ||||| | Sbjct 661 TGGCCGCTGTTACTACCACGCTGTGCACCAGGCCTGACTCGTCGTCGGCGCCGATGTGAG 602 Query 6967 CTTTCATGCCGAAATGCCACTGGTTACCTTTCTTGGTCTGGTGCATCTCTGGGTCACGCT 7026 | || |||||||| ||||||||||||||||||| || |||||||| || || || | Sbjct 601 CCTTAGCGCCGAAATAGTACTGGTTACCTTTCTTGGTTTGATGCATCTCAGGATCGCGTT 542 Query 7027 TGCCGCTGCCATTCTTGGTCGAACTGGGCGCGGCAATCAGCGAGGCGTCGACCACCGTGC 7086 |||| ||||||||||||||||||||| |||||||| ||| ||||| | |||| Sbjct 541 TGCCATCTTTGTTCTTGGTCGAACTGGGCGCGTGAATCAGCGTGGCATCGACGATGGTGC 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27324246157600