Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_015586.1 Length=5819 Score E Sequences producing significant alignments: (Bits) Value seq2792 95.1 4e-16 >seq2792 Length=4928 Score = 95.1 bits (104), Expect = 4e-16 Identities = 109/142 (77%), Gaps = 10/142 (7%) Strand=Plus/Plus Query 4691 TCCATCATCCGCCGCCATTCCTGCGCCTGCGCA-GCAGTGAGCGACAGCCAGGCCAGATC 4749 |||| |||||| ||||||||||||| || ||| || |||||||| ||||||| || ||| Sbjct 4568 TCCAGCATCCGGAGCCATTCCTGCGCTTG-GCAGGCGGTGAGCGATAGCCAGGGCAAATC 4626 Query 4750 TTCGGGCAGCAACTCGCGGCCTT-CGGGTGTGACCAGTCGGCCAGCCTTAAACGAAA--- 4805 ||| || |||| |||||| |||| ||| |||| ||| || || | | |||| Sbjct 4627 TTCCGGGAGCAGCTCGCGACCTTCCGGAAGTGATCAGGCGATCACC----GAGGAAATAG 4682 Query 4806 AACCGGCCCAAGGGCCGGTTAG 4827 ||||||||| ||||||||| || Sbjct 4683 AACCGGCCCGAGGGCCGGTCAG 4704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18506353310160