Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= NC_022089.1 Length=3780 Score E Sequences producing significant alignments: (Bits) Value seq43372 93.3 1e-15 >seq43372 Length=12071 Score = 93.3 bits (102), Expect = 1e-15 Identities = 148/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 1256 ATCGAGGAAGGCCGTGAAGAGGAGTCTTTTAGAAAGTTTCCACGAAACCACCTAACGTAT 1315 ||||| |||||| |||||||| | |||| |||||| | || || |||| || || Sbjct 7955 ATCGAAGAAGGCAAAGAAGAGGAAGCCTTTACGAAGTTTTCTCGCGACTACCTCACCTAC 7896 Query 1316 GGAGAAAAAATCAAGGCTATGGTCATGCAAAAGCGTGACTTCTTCAAGAGCAAAGGAGAT 1375 || || || ||||| || ||| | ||| || || || |||||| ||| ||||| Sbjct 7895 GGGGAGAACATCAAAGCCATGTTATCGCAGCGACGCGATTTTTTCAAGTCCAATGGAGAC 7836 Query 1376 CCTCACATTTGGTTGTTTGGAAACCCTGGATCCGGCAAGTCAGCCATTCTTCAAGTAATC 1435 || |||||||| | | | | | |||| |||||||| || ||||| ||||| Sbjct 7835 CCGCACATTTGCTAACTGGTACGCA---GATCTGGCAAGTCTGCGATTCTGCAAGTCGCG 7779 Query 1436 TACCCAGAATACTACAACAAGAACGTGGAGAA 1467 |||||| | || |||||||||||| | || || Sbjct 7778 TACCCAAAGTATTACAACAAGAACCTTGACAA 7747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11977936470500