Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= NC_021569.1 Length=7069 Score E Sequences producing significant alignments: (Bits) Value seq2663 158 5e-35 seq11843 93.3 2e-15 >seq2663 Length=1053 Score = 158 bits (174), Expect = 5e-35 Identities = 119/139 (86%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 6614 TGGCTGCGCTGCCGTGAGCACTGAACCGGGGTGTAGGGGCAGCGCCCCTACGGAAGCGCC 6673 |||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||| Sbjct 238 TGGCAGCGCTGCCGCGAGCAGTGA-CCGGGGTGTAGGGGCAGCGCCCCTACGGAAACGCC 180 Query 6674 TCACACGCGCTGGTAAGGTCTCGGCCCCGGCGCCGGCAGGACACCCGCAACAGGATCGGC 6733 ||||||||||||| ||| ||||||||| | | |||||||| || || |||||||| Sbjct 179 TCACACGCGCTGGCGAGGCCTCGGCCCCTGTACTGGCAGGACTGACGTCACTGGATCGGC 120 Query 6734 GTCAGGACCAGCCATCACC 6752 |||||| ||||||||| || Sbjct 119 GTCAGGGCCAGCCATCGCC 101 >seq11843 Length=1551 Score = 93.3 bits (102), Expect = 2e-15 Identities = 55/56 (98%), Gaps = 1/56 (2%) Strand=Plus/Minus Query 462 CCCGCCACCGGCACCCCAAGGCCGCTGGCGGGTTCTCTTGGGGCTTGGGGCAGGGG 517 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1188 CCCGCCACCGGCACCCCAAGGCCGCTGGCGGGTTCTCTTGGGGCTTGGGG-AGGGG 1134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 22502586809612