Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20x_20alni_20[genbank_20GCA_5F000439335.1_202013-07-23] 118,474 sequences; 235,999,877 total letters Query= NC_022089.1 Length=3780 Score E Sequences producing significant alignments: (Bits) Value seq75604 161 2e-36 >seq75604 Length=22698 Score = 161 bits (178), Expect = 2e-36 Identities = 187/251 (75%), Gaps = 1/251 (0%) Strand=Plus/Plus Query 1205 GAAGAAAAGAAACGCAAGCTTGATGACATCATCGTCGAAATGCGCCAACTCATCGAGGAA 1264 |||||||| | || ||||| |||||||||||| |||| ||||| ||||||||||| ||| Sbjct 6283 GAAGAAAA-ACGCGTAAGCTAGATGACATCATCATCGAGATGCGTCAACTCATCGAAGAA 6341 Query 1265 GGCCGTGAAGAGGAGTCTTTTAGAAAGTTTCCACGAAACCACCTAACGTATGGAGAAAAA 1324 || |||||| |||| | || | ||||| || | ||| || | || ||| |||| || Sbjct 6342 GGACGTGAAAAGGAAGCGTTCACCAAGTTCCCCAGGAACTACATCACCTATAGAGAGAAG 6401 Query 1325 ATCAAGGCTATGGTCATGCAAAAGCGTGACTTCTTCAAGAGCAAAGGAGATCCTCACATT 1384 || || | ||||| | ||||||||| || || ||| ||| || || || |||||| Sbjct 6402 ATTAAATCAATGGTTGGACGAAAGCGTGATTTTTTGAAGTCCAACGGGGACCCGCACATT 6461 Query 1385 TGGTTGTTTGGAAACCCTGGATCCGGCAAGTCAGCCATTCTTCAAGTAATCTACCCAGAA 1444 ||||| |||| || ||||| | |||| |||| ||||| || || | |||||| | Sbjct 6462 TGGTTAATTGGCGCACCGGGATCTGACAAGACAGCAATTCTGCATGTCGTGTACCCAAAG 6521 Query 1445 TACTACAACAA 1455 ||||||||||| Sbjct 6522 TACTACAACAA 6532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11968471020450