Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_022089.1 Length=3780 Score E Sequences producing significant alignments: (Bits) Value seq5906 111 4e-21 >seq5906 Length=768 Score = 111 bits (122), Expect = 4e-21 Identities = 210/304 (69%), Gaps = 4/304 (1%) Strand=Plus/Minus Query 804 AGTGGGATGCCCGCTTCAACGTACCAACTCAAGAAGACCTCGATGTTATCGTCGCTTCCG 863 ||||||| ||||| |||||||| | ||| | || |||||| | || ||| | | | Sbjct 715 AGTGGGACGCCCGTTTCAACGTGCAAACCGACGACGACCTCAACAACCTCCTCGATGCTG 656 Query 864 -TCAAGGCCGAAGTCCAAGCTGGTCGG-TTCAAGTACGTTCTCGTCTCCGGTGTCGAAGT 921 || || |||| | | || || ||| | ||| |||| || |||||||| | Sbjct 655 CTCGAG-CCGAGTGGGATTCCGGACGACTTCGA-TACCTTCTTATCGGAGGTGTCGAGAT 598 Query 922 TGGCTCGCGTCCTTTCCAGGATGACTACCTCATCCGACATGTTCACCTCGCCCTTGTCTA 981 || | || || ||| || ||||| | | ||||| || || ||| | ||||| Sbjct 597 CGGAACCCGACCAAACCAAGACGACTATCAAGTGCGACACGTCCATTGCGCAATCGTCTA 538 Query 982 CAATAACCGAGTCACCAAGTCAAGCATTCTCAAAAACCTGGGGGTCAAGCAAGGAAATGG 1041 ||| ||||| |||| |||||| ||||| ||||| ||| | ||||||||||||| || Sbjct 537 CAACAACCGCGTCAGCAAGTCCAGCATCCTCAAGAACTGGAAAATCAAGCAAGGAAACGG 478 Query 1042 GTATTACCTGGTCCCACGCAAACGCGAGTTTCCTTACAGCGGTTGGAAAAAACATCATAC 1101 || || || || ||||| || || || || ||||||||||| |||| | ||||||| Sbjct 477 CTACTATCTTGTTCCACGGAACCGAGATTTCCCTTACAGCGGATGGAGGGATCATCATAT 418 Query 1102 CAAG 1105 |||| Sbjct 417 CAAG 414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11982528945275