Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_023421.1 Length=1378 Score E Sequences producing significant alignments: (Bits) Value seq2075 100 2e-18 seq3690 86.0 5e-14 >seq2075 Length=104438 Score = 100 bits (110), Expect = 2e-18 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 627 CTACAAACCACGCGGCGAATGGTGGGACGGATACACCGGACAAGAGGAC-GTGATCCTGG 685 |||||| | || ||||| ||||||||||| ||| ||| | ||||||| || ||| ||| Sbjct 97338 CTACAAGGCCCGGGGCGAGTGGTGGGACGGCTACTGCGG-CCAGAGGACGGTCATCGTGG 97396 Query 686 ATGATTTCTACGGCTGGTTGAAGTTCGACGAACTTTTGAAAATATGTGACCGTTACCCGT 745 | | || ||||||||| |||||| |||||| || || | || ||| |||||||| Sbjct 97397 ACAAGTTTTACGGCTGGCTGAAGTACGACGAGCTGCTGCGTGTGTGCGACAGTTACCCGC 97456 Query 746 ATCGTGTCCCTGTGAAGGGCTCATTTG 772 || ||||| || ||||||||||||| Sbjct 97457 TGCGGGTCCCGGTCAAGGGCTCATTTG 97483 >seq3690 Length=31674 Score = 86.0 bits (94), Expect = 5e-14 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 629 ACAAACCACGCGGCGAATGGTGGGACGGATACACCGGACAAGAGGACGTGATCCTGGATG 688 |||| | || ||||| ||||||||||| |||| ||| ||| || ||| || |||||| Sbjct 1474 ACAAGGCCCGGGGCGAGTGGTGGGACGGTTACAACGGGCAAAAGACCGTAGTCGTGGATG 1533 Query 689 ATTTCTACGGCTGGTTGAAGTTCGACGAACTTTTGAAAATATGTGACCGTTACCCGTATC 748 ||||||| |||||| | ||| ||||||||| | | || ||| ||| |||| | Sbjct 1534 ATTTCTATGGCTGGCTCAAGCACGACGAACTGCTCCGGGTGTGAGACAGTTGCCCGCTGC 1593 Query 749 GTGTCCCTGTGAAGGGCTCATT 770 | |||| || |||||||| || Sbjct 1594 GGGTCCTGGTCAAGGGCTCCTT 1615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4299410201856