Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_021568.1 Length=1832 Score E Sequences producing significant alignments: (Bits) Value seq29356 89.7 6e-15 >seq29356 Length=2541 Score = 89.7 bits (98), Expect = 6e-15 Identities = 140/200 (70%), Gaps = 13/200 (7%) Strand=Plus/Minus Query 662 CCGGGCTG-GGCAAGTCCAGAGCCGCCCGCGAAGAAAGCAAAGCTACAGGAGAAGATACC 720 || ||||| |||||||||||| ||||| ||| || || ||||| || Sbjct 510 CCCGGCTGTGGCAAGTCCAGATATGCCCGAGAACAAG---------CACCAGAAG---CC 463 Query 721 TACTACAAACCAAGAGGAGAATGGTGGGATGGATACTGTGGACAACCTAATGTGGTCATC 780 |||||||||||| | || ||||||||||| |||||| |||||| ||||| || | Sbjct 462 TACTACAAACCACGCGGCGAATGGTGGGACGGATACACCGGACAAGAGGATGTGATCGTG 403 Query 781 GACGACTTTTATGGATGGATTAAATATGACGAACTTCTCAAAATTTGCGACCGATACCCC 840 || || || || || ||| | | | ||||||||| | ||||| || ||||| ||||| Sbjct 402 GATGATTTCTACGGCTGGTTGCAGTTCGACGAACTTTTGAAAATATGTGACCGTTACCCG 343 Query 841 TACCGCGTCCCAGTCAAAGG 860 | || || || || || || Sbjct 342 CATCGTGTTCCTGTGAAGGG 323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5722963820464