Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_023421.1 Length=1378 Score E Sequences producing significant alignments: (Bits) Value seq29356 1317 0.0 seq29 86.0 5e-14 seq1621 82.4 7e-13 >seq29356 Length=2541 Score = 1317 bits (1460), Expect = 0.0 Identities = 860/944 (91%), Gaps = 2/944 (0%) Strand=Plus/Minus Query 1 ACCCCTGCACTTTGGAAGACGGCAGAAGACTGTATAAGTCAATAGGCACAAAAGTATTTC 60 |||||||||||| ||||||||||||||| ||||||| ||| ||||||||| ||||||| | Sbjct 1086 ACCCCTGCACTTCGGAAGACGGCAGAAGCCTGTATACGTCGATAGGCACAGAAGTATTCC 1027 Query 61 TTCCAAGGTTGGAATTACGCAATGTCGAAGGTTTCCGTCCGCCGCGTGTGCTTCACACTG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1026 TTCCAAGGTTGGAATTACGCAATGTCGAAGGTTTCCGTCCGCCGCGTGTGCTTCACACTG 967 Query 121 AACAACTATACTGAGGAGGACCTCAAGTTCATAGAAGAGCATTTCAAAAGTGTGTCGAAG 180 ||||||||||||||||||||||| ||||||| || |||| |||| | |||| |||||| Sbjct 966 AACAACTATACTGAGGAGGACCTACGGTTCATACAAAAGCACTTCACAGGTGTATCGAAG 907 Query 181 TATCTGATCGTGGGCAAAAAAGTGGGTGAGAATGGGACCCCACATTCACAAGGTTTTATT 240 ||||| || ||||||||| |||||||||||| ||||||||||||| ||||||||| ||| Sbjct 906 TATCTTATTGTGGGCAAAGAAGTGGGTGAGACCGGGACCCCACATTTACAAGGTTTCATT 847 Query 241 AATCTAAAGAAGAAGACGCATTTCAACAGTGTGAAGAAGCTACTGCCCCGGGCCCACATC 300 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 846 AACCTAAAGAAGAAGACGCATTTCAACAGTGTGAAGAAGCTACTGCCCCGGGCCCACATC 787 Query 301 GAGAAAGCCAAAGGCAACGACCAGCATAACAAGGATTACTGCTCCAAGCAAGAGGTTGCC 360 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct 786 GACAAAGCCAAAGGCACCGACCAGCATAACAAGGATTACTGCTCCAAGCAAGAGGTCGCC 727 Query 361 TTTGAACATGGACAGATTCAAGGCCAAGGGAAGAGGAACGATCTGGCGGATGCTTTGGCC 420 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 726 TTTGAACATGGAGAGATTCAAGGCCAAGGGAAGAGGAACGATCTGGCGTCTGCTTTGGCA 667 Query 421 ACTGTCCGAGCTAATGGAGGAGACATCAAAGCGCTTGAGGATTCTCATTCTTTGGTGTAC 480 ||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||| Sbjct 666 ACTGTCCGAGCTAATGGGGGAGACATCAAAGCGCTTGAGGATTCTCATGCTGTGGTGTAC 607 Query 481 GCCAAGTACAAGCGAGGGATCTTGGCCTGCATCGACGACTTTGGATGGAAGAAGCCACGT 540 ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 606 GCCAAGTTCAAGAAAGGGATCTTGGCCTGCATCGACGACTTCGGATGGAAGAAGCCACGT 547 Query 541 GACTGGAAAACGGAAGTACACGTGCTCTGGGGCATCCCCGGCTGTGGCAAGTCCAGATAT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 546 GACTGGAAAACGGAAGTACACGTGCTCTGGGGCATCCCCGGCTGTGGCAAGTCCAGATAT 487 Query 601 GCCCGAGAACAAGCACCAGAAGCCTACTACAAACCACGCGGCGAATGGTGGGACGGATAC 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486 GCCCGAGAACAAGCACCAGAAGCCTACTACAAACCACGCGGCGAATGGTGGGACGGATAC 427 Query 661 ACCGGACAAGAGGACGTGATCCTGGATGATTTCTACGGCTGGTTGAAGTTCGACGAACTT 720 |||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 426 ACCGGACAAGAGGATGTGATCGTGGATGATTTCTACGGCTGGTTGCAGTTCGACGAACTT 367 Query 721 TTGAAAATATGTGACCGTTACCCGTATCGTGTCCCTGTGAAGGGCTCATTTGTGCAGTTT 780 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct 366 TTGAAAATATGTGACCGTTACCCGCATCGTGTTCCTGTGAAGGGCTCATTTGTGCAGTTT 307 Query 781 ACTGCTAAGAGGATTTACATTACTTCTAATGTAGCTGCTTCAGAGTGGTATCATTTTCAG 840 ||||||||||| ||||||||||||||||||||| ||| |||||||||||| || | Sbjct 306 ACTGCTAAGAGAATTTACATTACTTCTAATGTACCTGTGCCAGAGTGGTATCCTTCCCCT 247 Query 841 GGCTACGACCCTAC-TGCGTTGTACCGTCGTATGACCTCATATCTGACTTGGAATGACAT 899 |||| || ||||| ||| |||||||| ||| |||| | || || ||| ||| | Sbjct 246 GGCTTTGA-CCTACGTGCTTTGTACCGCCGTCTGACGACGTACGTGGTGTGGTGTGATGT 188 Query 900 GTGTAAAGAATTCAGACCAATGCCAATAAATATTAATTATTGAA 943 ||||||||| | || || ||||| | || ||||| |||| Sbjct 187 AAAGAAAGAATTCCAATCAGTGGCAATACAAATCAATTACTGAA 144 Score = 215 bits (238), Expect = 4e-53 Identities = 161/188 (86%), Gaps = 8/188 (4%) Strand=Plus/Minus Query 1192 TTTGGCATTTGGATGTGGTCGATGATCTGTAGTCTGTGATGACTCACTGCCATCCTGTTG 1251 ||||||| |||| |||||| || ||||||| ||||||| |||| | ||||| ||||||| Sbjct 1267 TTTGGCACTTGGGTGTGGTGGAAGATCTGTGGTCTGTGCTGACGCGCTGCCGTCCTGTTT 1208 Query 1252 TTCCTCTCTCTTCTGA-TTGGTCGACGGTATCGGCGCTGGCAATTCCTGATTGGTCGCCT 1310 ||||| | ||| |||| ||||||||||||||| |||||||| ||||||||||||||||| Sbjct 1207 TTCCTGTTTCTCCTGAATTGGTCGACGGTATCCGCGCTGGCGCTTCCTGATTGGTCGCCT 1148 Query 1311 GTTGCTCTTCCTCCTGTAGACACGCCTCCGGTAGAATGGCATGACTCAAAGTGCAGGGCT 1370 | |||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1147 GCAGCTCCTCCTCC-------ACGCCTCCGGTAGAATGGCATGACTCAAAGTGCAGGGCT 1095 Query 1371 CTAGTATT 1378 |||||||| Sbjct 1094 CTAGTATT 1087 >seq29 Length=714473 Score = 86.0 bits (94), Expect = 5e-14 Identities = 63/75 (84%), Gaps = 9/75 (12%) Strand=Plus/Minus Query 1114 GGAGTGGCCCGTGCTACCTTGGAAGGCTTCCAGAAAAACCGGCTAAACCGGCTGTATGTT 1173 || |||||||| ||| |||||||||||||||||||||||| ||||||||||| Sbjct 505060 GGTGTGGCCCGCGCTTCCTTGGAAGGCTTCCAGAAAAACC---------GGCTGTATGTT 505010 Query 1174 TGGTTGGTGTTTGCT 1188 ||||||||||||||| Sbjct 505009 TGGTTGGTGTTTGCT 504995 >seq1621 Length=125093 Score = 82.4 bits (90), Expect = 7e-13 Identities = 60/71 (85%), Gaps = 9/71 (13%) Strand=Plus/Minus Query 1118 TGGCCCGTGCTACCTTGGAAGGCTTCCAGAAAAACCGGCTAAACCGGCTGTATGTTTGGT 1177 ||||||| ||| |||||||||||||||||||||||| ||||||||||||||| Sbjct 124606 TGGCCCGAGCTTCCTTGGAAGGCTTCCAGAAAAACC---------GGCTGTATGTTTGGT 124556 Query 1178 TGGTGTTTGCT 1188 ||||||||||| Sbjct 124555 TGGTGTTTGCT 124545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4277899540992