Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_023874.1 Length=1790 Score E Sequences producing significant alignments: (Bits) Value seq29356 78.8 1e-11 >seq29356 Length=2541 Score = 78.8 bits (86), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 724 CTATTATAAACCCAGAGGAGAATGGTGGGACGGCTACATGCAGCAAACGTCTGTTATTAT 783 ||| || ||||| | || |||||||||||||| |||| ||| | ||| || | Sbjct 463 CTACTACAAACCACGCGGCGAATGGTGGGACGGATACACCGGACAAGAGGATGTGATCGT 404 Query 784 AGATGACTTCTATGGCTGGATAAAATACGATGAACTGCTGAAAATATGTGACAGATACCC 843 ||||| ||||| |||||| | | | ||| ||||| |||||||||||||| | ||||| Sbjct 403 GGATGATTTCTACGGCTGGTTGCAGTTCGACGAACTTTTGAAAATATGTGACCGTTACCC 344 Query 844 ACACAAGGTTCCAATAAAAGGAGGATTCGAAGAGTTTACAAGCAAATA-TATTTTTATTA 902 || ||||| | || || ||| | ||||||| || || | |||| |||| Sbjct 343 GCATCGTGTTCCTGTGAAGGGCTCATTTGTGCAGTTTAC-TGCTAAGAGAATTTACATTA 285 Query 903 CTTCAAATGT 912 |||| ||||| Sbjct 284 CTTCTAATGT 275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5589279459808