Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_023421.1 Length=1378 Score E Sequences producing significant alignments: (Bits) Value seq8038 82.4 7e-13 seq2430 82.4 7e-13 seq4616 78.8 8e-12 seq4298 78.8 8e-12 >seq8038 Length=25393 Score = 82.4 bits (90), Expect = 7e-13 Identities = 60/71 (85%), Gaps = 9/71 (13%) Strand=Plus/Plus Query 1118 TGGCCCGTGCTACCTTGGAAGGCTTCCAGAAAAACCGGCTAAACCGGCTGTATGTTTGGT 1177 ||||||| ||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 13129 TGGCCCGCGCTTCCTTGGAAGGCTTCCAGAA---------AAACCGGCTGTATGTTTGGT 13179 Query 1178 TGGTGTTTGCT 1188 ||||||||||| Sbjct 13180 TGGTGTTTGCT 13190 >seq2430 Length=136980 Score = 82.4 bits (90), Expect = 7e-13 Identities = 60/71 (85%), Gaps = 9/71 (13%) Strand=Plus/Minus Query 1118 TGGCCCGTGCTACCTTGGAAGGCTTCCAGAAAAACCGGCTAAACCGGCTGTATGTTTGGT 1177 |||||| |||| |||||||||||||||||||||||| ||||||||||||||| Sbjct 81144 TGGCCCATGCTTCCTTGGAAGGCTTCCAGAAAAACC---------GGCTGTATGTTTGGT 81094 Query 1178 TGGTGTTTGCT 1188 ||||||||||| Sbjct 81093 TGGTGTTTGCT 81083 >seq4616 Length=52563 Score = 78.8 bits (86), Expect = 8e-12 Identities = 59/71 (83%), Gaps = 9/71 (13%) Strand=Plus/Plus Query 1118 TGGCCCGTGCTACCTTGGAAGGCTTCCAGAAAAACCGGCTAAACCGGCTGTATGTTTGGT 1177 |||||| ||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 12230 TGGCCCACGCTTCCTTGGAAGGCTTCCAGAA---------AAACCGGCTGTATGTTTGGT 12280 Query 1178 TGGTGTTTGCT 1188 ||||||||||| Sbjct 12281 TGGTGTTTGCT 12291 >seq4298 Length=108628 Score = 78.8 bits (86), Expect = 8e-12 Identities = 59/71 (83%), Gaps = 9/71 (13%) Strand=Plus/Minus Query 1118 TGGCCCGTGCTACCTTGGAAGGCTTCCAGAAAAACCGGCTAAACCGGCTGTATGTTTGGT 1177 ||||||| ||| ||||||||||||||||||| |||| ||||||||||||||| Sbjct 86045 TGGCCCGCGCTTCCTTGGAAGGCTTCCAGAA---------AAACTGGCTGTATGTTTGGT 85995 Query 1178 TGGTGTTTGCT 1188 ||||||||||| Sbjct 85994 TGGTGTTTGCT 85984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4286006376960