Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_001944.1 Length=1993 Score E Sequences producing significant alignments: (Bits) Value seq437 77.0 4e-11 >seq437 Length=362111 Score = 77.0 bits (84), Expect = 4e-11 Identities = 99/137 (72%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 703 AATGGTGGGATGGATATGATGGGGAAGATGTCGTCATCTTGGACGACTTTTATGGGTGGC 762 ||||||||||||| |||| || || | || || ||||| || |||||||||||| Sbjct 289117 AATGGTGGGATGGTTATGTGGGACAACAGTATGTAATATTGGATGATTTTTATGGGTGGG 289176 Query 763 TACCTTATTGCGAGATGCTCCGCCTCTGCGACCGTTACCCACATAAAGTGCCAGTTAAGG 822 ||| ||| |||||| | || | || || | ||||| | ||||| ||||||| Sbjct 289177 TACAGTATGATGAGATGTTGCGTATTTGTGATAGGTACCCCTTGAGGGTGCCTGTTAAGG 289236 Query 823 GCGCTTTTGTGGAGTTT 839 | |||||||||||||| Sbjct 289237 GGTCTTTTGTGGAGTTT 289253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6268084984590