Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_003054.1 Length=1821 Score E Sequences producing significant alignments: (Bits) Value seq1513 86.0 7e-14 >seq1513 Length=22358 Score = 86.0 bits (94), Expect = 7e-14 Identities = 86/109 (79%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 652 TGGTGGGATGGCTATAATGGGCAG-GATGTGGTTGTCATGGATGATTTTTATGGGTGGCT 710 ||||||||||| ||| |||||| ||| | ||| | ||||||||||||| |||||| | Sbjct 8345 TGGTGGGATGGGTATGTGGGGCAGAGATAT-GTTATTTTGGATGATTTTTACGGGTGGGT 8403 Query 711 GCCTTACGATGACCTTTTAAGGATCTGTGATCGCTATCCTTTAAGGGTA 759 || || ||||| | || || || |||||||| |||||||| |||||| Sbjct 8404 GCAATATGATGAAATGTTGAGAATTTGTGATCGTTATCCTTTGAGGGTA 8452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5717747762870