Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_023421.1 Length=1378 Score E Sequences producing significant alignments: (Bits) Value seq1513 78.8 8e-12 >seq1513 Length=22358 Score = 78.8 bits (86), Expect = 8e-12 Identities = 110/152 (72%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 630 CAAACCACGCGGCGAATGGTGGGACGGATACACCGGACAAGAGG-ACGTGATCCTGGATG 688 ||||||||| || |||||||| || || || || ||| | || || |||||| Sbjct 8329 CAAACCACGTGGTCCCTGGTGGGATGGGTATGTGGGGCA-GAGATATGTTATTTTGGATG 8387 Query 689 ATTTCTACGGCTGGTTGAAGTTCGACGAACTTTTGAAAATATGTGACCGTTACCCGTATC 748 |||| ||||| ||| || | | || ||| | |||| ||| ||||| ||||| || | Sbjct 8388 ATTTTTACGGGTGGGTGCAATATGATGAAATGTTGAGAATTTGTGATCGTTATCCTTTGA 8447 Query 749 GTGTCCCTGTGAAGGGCTCATTTGTGCAGTTT 780 | || ||||| |||||||||||||| ||||| Sbjct 8448 GGGTACCTGTTAAGGGCTCATTTGTTGAGTTT 8479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4300309453440