Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_025246.1 Length=1966 Score E Sequences producing significant alignments: (Bits) Value seq437 78.8 1e-11 >seq437 Length=362111 Score = 78.8 bits (86), Expect = 1e-11 Identities = 92/121 (76%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 881 TACTATAAGCCTCGTGGCGATTGGTGGGATGGTTACCAT--ACTAATGCTACTGTTATCC 938 |||| ||| ||||||||| | |||||||||||||| || | | || ||| || Sbjct 289098 TACTTTAAACCTCGTGGCCAATGGTGGGATGGTTATGTGGGACAACAG-TA-TGTAATAT 289155 Query 939 TGGATGATTTTTATGGATGGATTAAGCTGGATGAAATGCTCCGTATTTGTGATCGGTACC 998 |||||||||||||||| ||| | || ||||| ||| | |||||||||||| |||||| Sbjct 289156 TGGATGATTTTTATGGGTGGGTACAGTATGATGAGATGTTGCGTATTTGTGATAGGTACC 289215 Query 999 C 999 | Sbjct 289216 C 289216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6181694839320