Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinus_20carpio_20[refseq_20GCF_5F000951615.1_202014-11-03] 9,378 sequences; 1,713,658,011 total letters Query= NC_015399.1 Length=1957 Score E Sequences producing significant alignments: (Bits) Value seq929 587 9e-165 seq1622 255 7e-65 seq964 89.7 6e-15 seq264 89.7 6e-15 >seq929 Length=282278 Score = 587 bits (650), Expect = 9e-165 Identities = 667/891 (75%), Gaps = 3/891 (0%) Strand=Plus/Minus Query 39 ACCGAAATCATGCCTAAGGCCACGTCTAAGACGCGACATTTGCAGAACCCGCGACAAGAT 98 || |||||||||||||||||| ||||||||| ||||| || | || || || || Sbjct 43904 ACGGAAATCATGCCTAAGGCCGTATCTAAGACGAGACATCTGAATGCACCACGGCAGAAT 43845 Query 99 GCTCCGCGGCGCGAACAACCTGTGAAAAGATGGTGTTTCACCCTGAACAACCCTACGGCT 158 | | | | ||||||||||||| ||| | |||||||| ||||||||||||||||||||| Sbjct 43844 GTTGCCAGTGGCGAACAACCTGTAAAACGCTGGTGTTTTACCCTGAACAACCCTACGGCT 43785 Query 159 GAGGAGCGTCGCCATATTCAAGAGATAATAACGGCGGACGCCGTAGACTTTGCCGTGATC 218 || ||||||| |||| || |||| ||||||||| | | | |||| || ||||| || ||| Sbjct 43784 GATGAGCGTCACCATGTTGAAGAAATAATAACGTCTGGCACCGTTGATTTTGCAGTCATC 43725 Query 219 GGCAATGAAGTAGGTGACAGTGGGACACCGCATCTTCAAGGATTTCTGAATATGAAAACA 278 ||||| |||||||||||| ||||| || ||||| || |||||| |||| ||||||||| Sbjct 43724 GGCAACGAAGTAGGTGACTCCGGGACGCCTCATCTACAGGGATTTGTGAAAATGAAAACA 43665 Query 279 AAACGTCGGCTGGGAACTATGAAAAAGTGGTTTAACGCTA-GAGCTCACTACGAGGCCGC 337 || ||||| || |||||||||||| ||||| ||| | | | ||||| |||| || Sbjct 43664 AAGCGTCGTTTGAAAACTATGAAAAACTGGTTGT-CGCCACGTGTTCACTTTGAGGTGGC 43606 Query 338 TAAAGGCACGGATCTACAAAACGACGAATACTGCACAAAGGGCGGCGATACTTACCTTCG 397 | ||| | |||||||| || || ||||| |||| ||||| || |||| |||| |||| Sbjct 43605 AAGAGGAAGTGATCTACAGAATGATGAATATTGCAGTAAGGGAGGTGATATTTACTTTCG 43546 Query 398 CATCGGTGAACCGGGCAAAGAACGCTGCAGAAACGATCTTCAAAAGGCGATAGACGTTGT 457 ||| || ||||||| | ||||| || || ||||||| ||||||||||| || | Sbjct 43545 CATTGGAGAACCGGTACATGAACGTCAGAGGAATGATCTTCTGAAGGCGATAGATGTCGC 43486 Query 458 GAAGAGATCCTCCGGGAGTATGCGGGCAGTTGCCGAGGCTTGTCCCGCTACTTTTATTCG 517 |||| ||| ||| |||||| || || || || || || || || | |||||| || Sbjct 43485 CAAGACTTCCGGCGGAAGTATGAAAGCTGTGGCGGAAGCCTGCCCTGCAAGTTTTATACG 43426 Query 518 TTATGGGCGGGGTCTACGTGATTACGCCAACGTGATGCAGTACCGGAAGCCACGTGATTT 577 ||||||||| || || | ||||||| |||||||||||||| |||| || | ||||| Sbjct 43425 TTATGGGCGTGGCATAAGAGATTACGTCAACGTGATGCAGTTCCGGTCCCCGCAAGATTT 43366 Query 578 CAAAACGGAAGTGAATGTTTACGTCGGAGACCCCGGATGTGGAAAGAGCCGGAAGGCGTC 637 ||| || |||| | | | || |||| |||||||||||||| | || |||| | Sbjct 43365 CAAGACAAAAGTCTTTATGTTCGCCGGACGACCCGGATGTGGAAAATCCAAGATGGCGGC 43306 Query 638 GGAGCTTTGTGCAGGCACCACTGTGTACTATAAGCCTCGCGGTATGTGGTGGGATGG-AT 696 || ||||| | || | || ||||| |||||||| ||| |||||||| || || Sbjct 43305 TGAACTTTGCACCGGAAGTACAACATACTACAAGCCTCGTGGTTCCTGGTGGGACGGTAT 43246 Query 697 ACGATGGACAAGAGAATGTAATTGTCGATGACTTTTACGGCTGGATGCCATGTGATGAAC 756 |||| || || || ||| || | ||||||||||| |||||||| |||||||||||| Sbjct 43245 ACGACGGCCACGACTGTGTTGTTATTGATGACTTTTATGGCTGGATTGCATGTGATGAAC 43186 Query 757 TGTTGAGAGTGTTTGATCGATATCCTTGTAAAGTACCGGTAAAAGGAGCCTATGTGGAAT 816 |||| | || | |||| ||||||| || ||| | || || ||||| || | ||| || | Sbjct 43185 TGTTATGTGTATGTGATAGATATCCGTGCAAATTTCCAGTGAAAGGTGCATTTGTTGAGT 43126 Query 817 TTGTGTCAACTAATATATATGTGACGTCTAACAAGCATGTGTGGCAATGGTATAAGTTTG 876 |||| | | ||| | ||| | | |||||||| ||||||||| |||||||| |||| Sbjct 43125 TTGTTGCCAAGAATGTGTATATCATGTCTAACAGACATGTGTGGGAATGGTATCGTTTTG 43066 Query 877 AAGGGTTTGACCCCGCCGCCGTCATGAGACGGGTTAATGTGTATCTTGTGT 927 | |||||||||||| ||||| || |||| || || ||||| || |||||| Sbjct 43065 AGGGGTTTGACCCCTCCGCCATCTTGAGGCGTGTGAATGTATACTTTGTGT 43015 Score = 527 bits (584), Expect = 8e-147 Identities = 796/1119 (71%), Gaps = 56/1119 (5%) Strand=Plus/Minus Query 39 ACCGAAATCATGCCTAAGGCCACGTCTAAGACGCGACATTTGCAGAACCCGCGACAAGAT 98 ||| ||||||||||||||||| | | |||||||| |||||| | | || || | || Sbjct 46078 ACCAAAATCATGCCTAAGGCCCCAGCAAAGACGCGTCATTTGAATACACCACGGGAGAAT 46019 Query 99 GCTCCGCGGCGCGAACAACCTGTGAAAAGATGGTGTTTCACCCTGAACAACCCTACGGCT 158 ||| | | ||||||| || ||||| | |||||||||||| | || ||||| |||||| Sbjct 46018 GCTTCTGGAGGCGAACAGCCGTTGAAACGCTGGTGTTTCACCATCAATAACCCGACGGCT 45959 Query 159 GAGGAGCGTCGCCATATTCAAGAGATAATAACGGCGGACGCCGTAGACTTTGCCGTGATC 218 | |||||||||||||| || |||| |||| |||||| | || |||||| |||||| Sbjct 45958 CACAAGCGTCGCCATATTGAACCGATAGTAACTGCGGACACAGTTGACTTTTGTGTGATC 45899 Query 219 GGCAATGAAGTAGGTGACAGTGGGACACCGCATCTTCAAGGATTTCTGAATATGAAAACA 278 || || |||||||||||||| ||||| ||||||||||| || ||| | |||||||| ||| Sbjct 45898 GGAAACGAAGTAGGTGACAGCGGGACGCCGCATCTTCAGGGCTTTATTAATATGAAGACA 45839 Query 279 AAACGTCGGCTGGGAACTATGAAAAAGTGGTT-TAACGCTAGAGCTCACTACGAGGCCGC 337 || ||| | ||| ||| ||||| || ||| | | || | || || |||| ||||| || Sbjct 45838 AAGCGTTGCCTGAAAACAATGAAGAATTGGCTGTCAC-CGAGGGCACACTTCGAGGTTGC 45780 Query 338 TAAAGGCACGGATCTACAAAACGACGAATACTGCACAAAGGGCGGCGATACTTACCTTCG 397 | ||||| || ||||||||||||| ||||||| |||||||| ||| |||||| || Sbjct 45779 AAGAGGCAGCGACTTACAAAACGACGAGTACTGCAGCAAGGGCGGGAATATTTACCTGCG 45720 Query 398 CATCGGTGAACCGGGCAAAGAACGCTGCAGAAACGATCTTCAAAAGGCGATAGACGTTGT 457 |||||| |||||||| | ||| | | ||||||||||||| ||||| |||| |||| Sbjct 45719 CATCGGCGAACCGGGGAGAGAGAGGAGGAGAAACGATCTTCTTAAGGCCGTAGATGTTGC 45660 Query 458 GAAGAGATCCTCCGGGAGTATGCGGGCAGTTGCCGAGGCTTGTCCCGCTA-CTTTTATTC 516 |||| ||| | | ||||||||||| || || || || || ||||| ||||||| | Sbjct 45659 GAAGGCTTCCGGCTGAAGTATGCGGGCTGTGGCAGAAGCATG-CCCGCAGGCTTTTATCC 45601 Query 517 GTTATGGGCGGGGTCTACGTGATTACGCCAACGTGATGCAGTACCGGAAGCCACGTGATT 576 |||||||| ||| | | |||||||| || ||||| |||| ||| ||| ||||||| Sbjct 45600 AGTATGGGCGTGGTTTGCTTGATTACGTAAATGTGATCCAGTTCCGCCCGCCCCGTGATT 45541 Query 577 TCAAAACGGAAGTGAATGTTTACGTCGGAGACCCCGGATGTGGAAAGAGCCGGAAGGCGT 636 ||||||| |||| | | | | || |||||||| ||||||| || ||| Sbjct 45540 TCAAAACAAAAGTCTTCATCTTCATGGGCTGCCCCGGATTTGGAAAGTCAAAGATGGCCG 45481 Query 637 CGGAGCTTTGTGCAGGCACCACTGTGTACTATAAGCCTCGCGGTATGTGGTGGGATGGAT 696 | || || || || || | || | |||||||||||| || ||| |||||||| || | Sbjct 45480 CCGAACTCTGCGCCGGAAACAGTACGTACTATAAGCCACGTGGTCCCTGGTGGGACGGCT 45421 Query 697 ACGATGGACAAGAGAATGTAATTGTCGATGACTTTTACGGCTGGATGCCATGTGATGAAC 756 | || || || || || | ||||| || || || || |||||| | |||||||||| Sbjct 45420 ATGACGGCCA--TGACTG---TCGTCGACGATTTCTATGGATGGATGGCCTGTGATGAAC 45366 Query 757 TGTTGAGAGTGTTTGATCGATATCCTTGTAAAGTACCGGTAAAAGGAGCCTATGTGGAAT 816 || ||||| ||| ||||| ||||| ||||||||||| || ||||| || | Sbjct 45365 TGCTGAGA-TGTGTGATCATTATCCCTGTAAAGTACCCGTGAAAGGTGC---------GT 45316 Query 817 TTGTGTCAACTAATATATATGTGACGTCTAACAAGCATGTGTGGCAATGGTATAAGTTTG 876 ||||| | | ||||| || | || || || || |||||| | |||||| | |||| Sbjct 45315 TTGTGGCGAAGAATATCTACATCACCTCCAATCGCCACGTGTGGAAGTGGTATCATTTTG 45256 Query 877 AAGGGTTTGACCCCGCCGCCGTCATGAGACGGGTTAATGTGTATCTTGTGTACGACAATG 936 | || |||||||| ||||| | ||||||| || |||||||| |||| | || | | Sbjct 45255 AGGGCTTTGACCCGTCCGCCATTTTGAGACGTGTAAATGTGTACTTTGTTTTTGATGAGG 45196 Query 937 CCGGGGAGAGATTTGTCAATCTCCGTGAATCGGCTATGTATGACCCTGTTACCATGAGAT 996 | || | |||| | | || ||| ||||||| ||| | || |||| || Sbjct 45195 GCTGGAACCGATTCACCGACCTGTGTG--------CTGTATGATCCTCTGACAATGAAAT 45144 Query 997 ATTGTTATTGAA--TAAAC----AAACGA-TGAAGAAG-TACTAAAAT-GCCTTTTATTT 1047 | |||||||| |||| |||| | ||| | | |||||| || ||||||| Sbjct 45143 ACAATTATTGAAATGAAACAATAAAACCATTGATTTTGCAAGTAAAATGGCTTTTTATTC 45084 Query 1048 TTGTTG----------ACAATATTAAAAAGAACCGATCAT-----TTTTGTACAtttttt 1092 |||||| | |||| ||||| | || | | |||| ||| ||||| Sbjct 45083 TTGTTGTCACACTTTAAAAATAATAAAAGGTTCCACTGCTGCTGCTTTTTAACAATTTTT 45024 Query 1093 ttG--TTTTAC-ATGCTTAACAAACAAACATAAAGTAAG 1128 ||| ||||| ||||||||||||||||| |||||||| Sbjct 45023 TTGGTCTTTACAATGCTTAACAAACAAAC--AAAGTAAG 44987 Score = 401 bits (444), Expect = 8e-109 Identities = 1065/1604 (66%), Gaps = 79/1604 (5%) Strand=Plus/Minus Query 110 CGAACAACC-TGTGAAAAGATGGTGTTTCACCCTGAACAACCCTACGGCTGAGGAGCGTC 168 |||| |||| || ||||| ||||||||| ||| | |||||||| |||| |||||| Sbjct 48907 CGAAAAACCCTGCGAAAAAATGGTGTTTAACCATTAACAACCCGACGGTGGAGGAGATGA 48848 Query 169 GCCATATTCAAGAGATAATAACGGCGGACGCCGTAGACTTTGCCG-TGATCGGCAATGAA 227 | || || | ||||||||||| | | || | |||| | | ||||| ||| Sbjct 48847 GTCACGTTAAGGAGATAATAACTTCTG-CGATGGCTTCTTTCACTATTATCGGTCGAGAA 48789 Query 228 GTAGGTGACAGTGGGACACCGCATCTTCAAGGATTTCTGAATATGAAAACAAAACGTCGG 287 ||||||| | |||||||| ||||||||||| ||| |||| ||||||| |||||| | Sbjct 48788 ATAGGTGAGAACGGGACACCACATCTTCAAGGGTTTGTGAACTTGAAAACCAAACGTAGA 48729 Query 288 CTGGGAACTATGAAAAAGTGGTT-TAACGCTAGAGCTCACTACGAGGCCGCTAAAGGCAC 346 ||| |||||||| || ||| | | || | | ||||||| || || |||||||| Sbjct 48728 CTGTCTACTATGAAGAAATGGCTGTCAC-CACGTGCTCACTTTGAACTGGCCAAAGGCAC 48670 Query 347 GGATCTACAAAACGACGAATACTGCACAAAGGGCGGCGATACTTACCTTCGCATCGGTGA 406 ||| ||||||| |||||||| |||| || || ||||||| |||||| | ||| || | Sbjct 48669 TGATTTACAAAATGACGAATATTGCAGTAAAGGAGGCGATATTTACCTGCACATTGGAAA 48610 Query 407 ACCGGGCAAAGAACGCTGCAGAAACGATCTTCAAAAGGCGATAGACGTTGTGAAGAGATC 466 || || | || | || | || | |||||| || || | ||| ||| Sbjct 48609 TCCTGGTCATGAGAGGGTTAGTAGTGACTTGGCTGTGGCGATTGAAGTCGCCAAGCCATC 48550 Query 467 CTCCGGGAGTATGCGGGCAGTTGCCGAGGCTTGTCCCGCTACTTTTATTCGTTATGGGCG 526 | |||| ||| | || | || || || || || || | || ||| | |||||||||| Sbjct 48549 CGCCGGAAGTCTTCGCCCTGTAGCGGAAGCATGCCCTACGACCTTTGTACGTTATGGGCA 48490 Query 527 GGGTCTACGTGATTACGCCAACGTGATGCAGTACCGGAAGCCACGTGATTTCAAAACGGA 586 || |||||||| |||| ||||||||| ||| |||| ||| | || || Sbjct 48489 TATCCTGCGTGATTATCTCAACATGATGCAGTTTGTGAAACCACATGACTGTAAGACTTC 48430 Query 587 AGTGAATGTTTACGTCGGAGACCCCGGATGTGGAAAGAGCCGGAAGGCGTCGGAGCTTTG 646 |||| || | ||||||| ||| ||| ||| ||| ||| | | | | || | || Sbjct 48429 CGTGATGGTGCTCATCGGAGAACCCAGATATGGCAAGTCACGGTACGTGGCTGACTTGTG 48370 Query 647 TGCAGGCACCACTGTGTACTATAAGCCTCGCGGTATGTGGTGGGATGGATACGATGGACA 706 | |||| | ||||||||||||| || || ||| ||| ||| |||| || Sbjct 48369 TTAAGGCCAAAAGATGTACTATAAGCCCCGTGGGCCATGGCGGGGTGGCGACGACTCTCA 48310 Query 707 AGAGAATGTAATTGTCGATGACTTTTACGGCTGGATGCCATGTGATGAACTGTTGAGAGT 766 ||| ||||| | ||||||| | ||||| ||||| | | | ||||||| || | || Sbjct 48309 AGACAATGTTGTCTTCGATGATTACTACGGGTGGATTGCGTATTATGAACTTTTACGTGT 48250 Query 767 GTTTGATCGATATCCTTGTAAAGTACCGGTAAAAGGAGC-CTATGTGGAATTTGT-GTCA 824 | ||| |||| | ||||| || || || || || | || | || | ||||| | || Sbjct 48249 CTGTGACAGATACTCCTGTAAGGTCCCTGTGAAGGGCTCACTTTCTG-AGTTTGTTGCCA 48191 Query 825 ACTAATATATATGTGACGTCTAACAAGCATGTG---TGGCA-ATGGT--ATAAGTTTGAA 878 | | | | | | | || |||||||| | | | |||| |||| |||| | || Sbjct 48190 AGTGGT-TGTTTTTCACCTCTAACAAACGTCTCAAATGGCGGATGGGTCATAACCCTCAA 48132 Query 879 GGGTTTGACCCCGCCGCCGTCATGAGACGGGTTAATGTGTATCTTGTGTACGACAATGCC 938 ||| || || | | ||| || || | | ||||| || |||| Sbjct 48131 AA---TGATACCAT-----TC-TCAAACGTTTTCATTT--ACTATGTGTGGGA---TGCC 48086 Query 939 GGG---GAGAGATTTGTCAATCTCCGTGAATCGGCTATGTATGACCCTGTTACCATGAGA 995 || | | | ||| | || | | || ||||||||| ||||||||||||||||| Sbjct 48085 GGACGTGGTTGCTCTGTGGACCTTGATCAGTCCGCTATGTATAACCCTGTTACCATGAGA 48026 Query 996 TATTGTTATTGAATAAAC------------AAACG--ATGAAGAAGTACTAAAATGCCTT 1041 || ||| ||| | || ||||| || ||||| ||||||| ||| Sbjct 48025 TACAATTACTGATTGAAATGATGACGCAATAAACGTGATTTCAAAGTATTAAAATGTCTT 47966 Query 1042 TTATTTTTGTTG----ACAATATTAAAAAGAACCGATCATTTTTGTACAttttttttGT- 1096 | ||| |||||| | |||| ||||||||| | | || |||||||||| || Sbjct 47965 T-ATTCTTGTTGTGATAAAATAATAAAAAGAAATGCTGCTT-----ACATTTTTTTGGTC 47912 Query 1097 --TTTACATGCTTAACAAACAAACATAAAGTAAGG-AGGTGTCTCCGTTAGNNNNNNNNN 1153 ||| ||| ||||||||||||||| |||||||| || |||||| ||| Sbjct 47911 TTTTTTGATGTTTAACAAACAAACATTAAGTAAGGGAGATGTCTC---TAGAAGTTTCTC 47855 Query 1154 NNNNNNNN-TTGCACTGAAGTCAAGTACAGAATCCTTCAGTGCGCGGAGCGCCGGTGGAG 1212 |||||||||||| || | |||||||||| ||||||| | || ||||| Sbjct 47854 CGTTAGAAGTTGCACTGAAGTATAGGATGCAATCCTTCAGCACGCGGAGTGTCGTTGGAG 47795 Query 1213 GGCCGGAGGCCCGACACCTCTGGTACGGCGTAGCCGTAGCCTACGCCG--TTAAATCCGG 1270 ||| |||||||||| | | ||||||||||| |||||||||| | | | ||||| || Sbjct 47794 GGCTGGAGGCCCGAAAACGCTGGTACGGCGAAGCCGTAGCCCCCACTGGACTAAATGCGA 47735 Query 1271 TTTCTGAATAAGACGTAGTATTTGATAATTAGTTTGTACCCGATTGCAGAAGGGGCCCCG 1330 ||||||||| || ||| |||||||| || |||||||| || || ||| || | | Sbjct 47734 TTTCTGAATGTGATGTAATATTTGATGATAAGTTTGTAACCTATGGCATTAGTGTCTTGA 47675 Query 1331 GTGTTTGAAGGTAACCATATTTTGAGCCCGTAATGAGGTACGCCGTCGTGTACTGTGTTA 1390 |||| | |||||||||| || | || ||||| || || | ||||| ||| || Sbjct 47674 CTGTTAGCCGGTAACCATAACTTCATACCATAATGGGGGACTGAG-GGTGTAGTGTATTG 47616 Query 1391 ATCCATGCACCGGATCGAATATTCAGAAATCCGTAGTTGGTAGAGGCGGAAGACTTGTAA 1450 ||||| | || || | | |||| || |||||||| || || | | ||||| ||| Sbjct 47615 ATCCAGGGAC--AATTG-AGATTCTTGAACCCGTAGTTAGTGGATGACGCTGACTTATAA 47559 Query 1451 ATTTCAATATTGGGACGAGGAGTAAAGATCCTAATATGTGTCCTGTTCGAAATAAACATT 1510 || ||||| || | || ||||| || || |||| ||||| | | || || Sbjct 47558 ATCTCAATGTTTG--------GTGAAGATTCTGATGTGTGGTCTGTTACACTTCCACTTT 47507 Query 1511 TTTCTAGAGGAGTAGTCCTTAAACGGATCTGCAGTGCTAGTAGCCATGGTAGCGTCGTCG 1570 |||| | || || || ||||| ||||||| || | ||||| | ||| ||||| ||| Sbjct 47506 CTTCTTGTGGTGTGATCTTTAAATGGATCTGTAGCGGAAGTAGTAAGGGTGGCGTCATCG 47447 Query 1571 TAATCGACAGCTGTGCTACCGTAAAGGACCTTATCTCTGTCAGCGTTAATTGGAACGTTG 1630 ||||| | |||||| || || | || ||||| | || | ||| | |||| ||| Sbjct 47446 TAATCAATGCATGTGCTGCCCTATAAAACTTTATCATTATCTGGGTTGAGTGGATGGTT- 47388 Query 1631 TTGAATTCAGGCCACAGTTGCACGACAACTTTACTGATCTTATA 1674 |||||||| ||||||| ||||| |||| ||| ||||||| || Sbjct 47387 TTGAATTCCGGCCACACCTGCACAACAATTTTGTTGATCTTGTA 47344 Score = 255 bits (282), Expect = 7e-65 Identities = 493/712 (69%), Gaps = 29/712 (4%) Strand=Plus/Minus Query 1261 TTAAATCCGGTTTCTGAATAAGACGTAGTATTTGATAATTAGTTTGTACCCGATTG---C 1317 ||| || | |||||||||||| || ||||| ||||| || || ||||| ||| | | Sbjct 34539 TTATATACAGTTTCTGAATAACACATAGTACTTGATGATCAGCTTGTATGAGATGGTGCC 34480 Query 1318 AGAAGGGGCCCCGGTGTTTGAAGGTAACCATATTTTGAGCCCGTAATGAGGTACGCCGTC 1377 | | || | | | | | || | ||||||||| | ||||| || ||||| || Sbjct 34479 TGTAAGG---CTAGCGCTAGGTGGCAGCCATATTTTCAAGCCGTAGTGGGGTACAGAATC 34423 Query 1378 GTGTACTGTGTTAATCCATGCACCGGATCGAATATTCAGAAATCCGTAGTTGG---TAGA 1434 || | || ||||||||||| || || |||||| || || ||||| | |||| Sbjct 34422 ATGAATCTCATTTATCCATGCACCAGAGTTAACATTCAGGAAGCCATAGTTTGATGTAGA 34363 Query 1435 GGCGGAAGACTTGTAAATTTCAATATTGGGACGAGGAGTAAAGATCCTAATATGTGTCCT 1494 ||| ||| ||||||||||||||||| || | || || || || || || || | ||| Sbjct 34362 GGC---AGATTTGTAAATTTCAATATTAGGCCTGGGTGTGAAAATTCTTATGTGAGGCCT 34306 Query 1495 GTTCGAAATAAACATTTTTCTAGAGGAGTAGTCCTTAAACGGATCTGCAG-TGCTAGTAG 1553 ||| || ||||||||||| || ||||| || || || || | | | ||| ||| Sbjct 34305 GTTGCTTATGAACATTTTTCTGGAAGAGTAATCTTTGAAAGGGTGGGTTGAAGCT-GTAC 34247 Query 1554 CCATGGTAGCGTCGTCGTAATCGACAGCTGTGCTACCGTAAAGGACCTTATCTCTGTCAG 1613 |||| ||||| || | |||| ||| | ||||| || || || | || Sbjct 34246 TGATGGAGGCGTCATCATGGTCGATGAATGTAGTCCCGTACAGTACTTTGTTGTATTCTC 34187 Query 1614 CGTTAATTGGAACGTTGTTGAATTCAGGCCACAGTTGCACGACAACTTTACTGATCTTAT 1673 ||| || || |||||||||||||| ||||| | ||| || |||||||| ||||| |||| Sbjct 34186 TGTTGATGGGGACGTTGTTGAATTCCGGCCATATTTGAACAACAACTTTTCTGATTTTAT 34127 Query 1674 AATAGTCCCAGTAGTTCTTT-GGATACGACACATCAGACAATAAGAAAACAATTCCCGAA 1732 | ||||||||||| | |||| || || || || | | |||| | ||| | Sbjct 34126 AGTAGTCCCAGTA-TCCTTTAGGGTATTGAACGTCGCTTAGGATGAAAGTGAGTCCGGTT 34068 Query 1733 GAGAGCCCGCTGGTAGCATTCCAGGTCAAATGATCGTGTTTGATAGCTCGTAAACGGAAG 1792 || | ||| | | | |||||||| | || || ||||| || |||| || | | Sbjct 34067 GATAAACCGTTAGATGTGTTCCAGGTGAGGTGCTCATGTTTTATGCCTCGATGTCGCATG 34008 Query 1793 TAGGAGTATCG--TCCTGTGTGTCGCCTTCTTCTGACGTACTTCCGTCGCCGCCATCCAC 1850 || |||||||| ||| ||||| ||| ||||||||||| ||||| | |||||||| Sbjct 34007 TATGAGTATCGGTTCC--AGTGTCTCCTCCTTCTGACGTAACGTCGTCGTCTCCATCCAC 33950 Query 1851 GTGAGCTCCGACGCCTTCCGGCTCGTC---GTCTGGCACGCCTTCTG-GGGAGGAGAAAT 1906 |||| | | |||| | || ||||| || || |||||||||| |||||||| ||| Sbjct 33949 GTGACCGCTGACGTCGTC---TTCGTCCATTTCCGGTACGCCTTCTGTGGGAGGAG-AAT 33894 Query 1907 CAATTAGTGACGCGTATATAA-CCGGAAGTGCCGCAGTGACTGCCTAGTATT 1957 |||||||||||| ||||| || || |||| ||||||||||||||||||| Sbjct 33893 CAATTAGTGACGTGTATAAAATCCAAGCGTGCTGCAGTGACTGCCTAGTATT 33842 Score = 190 bits (210), Expect = 3e-45 Identities = 376/550 (68%), Gaps = 10/550 (2%) Strand=Plus/Minus Query 1414 CAGAAATCCGTAGTTGGTAGAGGCGGAAGACTTGTAAATTTCAATATTGGGACGAGGAGT 1473 |||| |||| || || | | | ||| ||||| || | |||||| || || | ||| || Sbjct 44833 CAGAGATCCATAATTAGATGTAGAGGAGGACTTATACAATTCAATGTTAGGCCTAGGGGT 44774 Query 1474 AAAGATCCTAATATGTGTCCTGTTCGAAATAAACATTTTTCTAGAGGAGTAGTCCTTAAA 1533 || || | ||| || | |||||| ||||| | | | || || || ||||| || Sbjct 44773 GAAAATACGAATGTGAGGCCTGTTACTGATAAATAACTCCTTGGAAGAATAATCCTTGAA 44714 Query 1534 CGGATCTGCAGTGCTAGTAGCCATGGTAGCGTCGTCGTAATCGACAGCTGTGCTACCGTA 1593 ||||| | || | || | | | |||||| || ||||||| | | || || ||||| Sbjct 44713 AGGATCAGTAGAGGCTGTGGTAACAGAAGCGTCATCATAATCGATAACAGTACTTCCGTA 44654 Query 1594 AAGGACCTTATCTCTGTCAGCGTTAATTGGAACGTTGTTGAATTCAGGCCACAGTTGCAC 1653 || || || | || ||| || || || || |||||||||||||| | || || Sbjct 44653 CAGAACTTTGTTGTATTCCCTGTTCATAGGGACATTATTGAATTCAGGCCATAACTGAAC 44594 Query 1654 GACAACTTTACTGATCTTATAATAGTCCCAGTAGTTCTTTGGATACGACACATCAGACAA 1713 ||| ||||| ||||| ||||| || |||||||| || ||||| | ||| || Sbjct 44593 GACCACTTTTCTGATTTTATAGTACTCCCAGTATGATTTAGGATATTGAATGTCACTCAG 44534 Query 1714 TAAGAAAACAATTCCCGAAGAGAGCCCGCTGGTAGCATTCCAGGTCAAATGATCGTGTTT 1773 | ||| | || | ||| | || |||| | |||||||||| ||||| || || Sbjct 44533 GATGAATTGTAGGCCTGTAGATAAGCCACTGGATGTGTTCCAGGTCAGGTGATCATGCTT 44474 Query 1774 GATAGCTCGTAAACGGAAGTAGGAGTATC-GTCCTGTGTGTCGCCTTCTTCTGACGTACT 1832 || ||| || | ||| |||| || || ||| ||||| ||| ||||||||||| | Sbjct 44473 TATCCCTCTGTGTCGCATGTATGAGTGTCGGTTCTG-GTGTCTCCTCCTTCTGACGTATT 44415 Query 1833 TCCGTCGCCGCCATCCACGTGAGCTCCGACGCCTTCCGGCTCGTCG---TCTGGCACGCC 1889 | ||| ||||| ||||| || | | |||| || |||| | || |||||||| Sbjct 44414 GTCTTCGTCGCCACCCACGGGACCACTGACG---TCGCCATCGTTGATTTCGGGCACGCC 44358 Query 1890 TTCT-GGGGAGGAGAAATCAATTAGTGACGCGTATATAA-CCGGAAGTGCCGCAGTGACT 1947 |||| ||||||||| | ||||||| || ||||| || ||| |||||||||||||| Sbjct 44357 TTCTATGGGAGGAGACAGTGATTAGTGGCGTGTATAAAATCCGAGCGTGCCGCAGTGACT 44298 Query 1948 GCCTAGTATT 1957 |||||||||| Sbjct 44297 GCCTAGTATT 44288 Score = 181 bits (200), Expect = 1e-42 Identities = 201/264 (76%), Gaps = 3/264 (1%) Strand=Plus/Minus Query 48 ATGCCTAAGGCCACGTCTAAGACGCGACATTTGCAGAACCCGCGACAAGATGCTCCGCGG 107 |||||||||||| | | ||||| |||||| | | || || | ||||| | | Sbjct 44219 ATGCCTAAGGCCCCAGCGAAGACATATCATTTGAATACACCACGGGAGAATGCTTCCGGA 44160 Query 108 CGCGAACAACCTGTGAAAAGATGGTGTTTCACCCTGAACAACCCTACGGCTGAGGAGCGT 167 ||||||| || |||||| | |||||||||||| | || ||||| || ||||| ||||| Sbjct 44159 GGCGAACAGCCGGTGAAACGCTGGTGTTTCACCATCAATAACCCGACAGCTGACAAGCGT 44100 Query 168 -CGCCATATTCAAGAGATAATAACGGCGGACGCCGTAGACTTTGCCGTGATCGGCAATGA 226 ||||||||| || ||||| ||||||||||| | || ||||| |||||||| ||||| Sbjct 44099 ACGCCATATTGAACAGATAGTAACGGCGGACACAGTTGACTTCTGTGTGATCGGAAATGA 44040 Query 227 AGTAGGTGACAGTGGGACACCGCATCTTCAAGG-ATTTCTGAATATGAAAACAAAACGTC 285 |||||||||||| ||||| |||||||||| || ||| | |||||||| ||||| ||| Sbjct 44039 AGTAGGTGACAGCGGGACGTCGCATCTTCAGGGTCTTTATTAATATGAAGACAAAGTGTC 43980 Query 286 GGCTGGGAACTAT-GAAAAAGTGG 308 | ||| ||| || ||| || ||| Sbjct 43979 GCCTGAAAACAATAGAAGAATTGG 43956 Score = 170 bits (188), Expect = 2e-39 Identities = 314/455 (69%), Gaps = 4/455 (1%) Strand=Plus/Minus Query 1506 ACATTTTTCTAGAGGAGTAGTCCTTAAACGGATCTGCAGTGCTAGTAGCCATGGTAGCGT 1565 ||||| |||| | | ||| || ||||| ||||||| || ||||| | ||| |||| Sbjct 49487 ACATTCTTCTTGTAGTGTAATCTTTAAATGGATCTGTAGCAGAAGTAGTAAGGGTGGCGT 49428 Query 1566 CGTCGTAATCGACAGCTGTGCTACCGTAAAGGACCTTATCTCTGTCAGCGTTAATTGGAA 1625 | |||||||||| |||||| ||||| | || | ||| | || | ||| | ||| | Sbjct 49427 CATCGTAATCGATGCATGTGCTGCCGTATAAAACTTAATCATTATCTGGGTTGAGTGGTA 49368 Query 1626 CGTTGTTGAATTCAGGCCACAGTTGCACGACAACTTTACTGATCTTATAATAGTCCCAGT 1685 | | | |||||| | ||||| || || |||| ||| ||||||| || |||||||||| Sbjct 49367 TGGTTTCGAATTCCGTCCACACCTGTACAACAATTTTGTTGATCTTGTAGTAGTCCCAGT 49308 Query 1686 AGTTCTTTGGATACGACACATCAGACAATAAGAAAACAATTCCCGAAGAGAGCCCGCTGG 1745 |||| | || | | || | | || ||| | ||| | ||||| ||| | | Sbjct 49307 AGTTTTGCGGGAATGTAACGCCGCTTATTATGAACGTATATCCGGTCGAGAGACCGGTTG 49248 Query 1746 TAGCATTCCAGGTCAAATGATCGTGTTTGATAGCTCGTAAACGGAAGTAGGAGTATC-GT 1804 | ||| || | ||| ||||| ||||| | | || |||||||| | ||||| || Sbjct 49247 ATGGCGTCCTTGTTAGATGGTCGTGCTTGATGCCCCAGAAGCGGAAGTACGTGTATCTGT 49188 Query 1805 CCTGTGTGTCGCCTTCTTCTGACGTACTTCCGTCGCCGCCATCCACGTGAGCTCCGACGC 1864 | | |||| || | ||||||||||||||| | || |||||| ||| | | |||| Sbjct 49187 TCCGC-TGTCTTCTGCATCTGACGTACTTCCGGTGTCGGAATCCACATGATCGCTGACGT 49129 Query 1865 CTTCCGGCTCGTCGTCTGGCACGCCTTCTG-GGGAGGAGAAATCAATTAGTG-ACGCGTA 1922 || | | |||| ||||| || || ||| |||||| | || ||||||| | | ||||| Sbjct 49128 CTACGAACACGTCATCTGGGTCGTCTCCTGTGGGAGGGGCAAACAATTAGCGCATGCGTA 49069 Query 1923 TATAACCGGAAGTGCCGCAGTGACTGCCTAGTATT 1957 || | |||| ||| |||| | |||||||||||| Sbjct 49068 TAAATCCGGGCATGCTGCAGAGGCTGCCTAGTATT 49034 Score = 149 bits (164), Expect = 8e-33 Identities = 179/241 (74%), Gaps = 3/241 (1%) Strand=Plus/Minus Query 42 GAAATCATGCCTAAGGCCACGTCTAAGACGCGACATTTGCAGAACCCGCGACAAGATGCT 101 |||| |||||||||||||| | ||||| |||||||| | ||||| |||||| || Sbjct 47196 GAAACTATGCCTAAGGCCACCGCGAAGACAAGACATTTGAATAACCCAAGACAAGGGACT 47137 Query 102 --CCGCGGCGCGAACAACCTGTGAAAAGATGGTGTTTCACCCTGAACAACCCTACGGCTG 159 ||| || |||| | || |||||||||||||||||||| ||||| ||||| ||| | | Sbjct 47136 TTCCG-GGAACGAATATCCAGTGAAAAGATGGTGTTTCACGCTGAATAACCCGACGACAG 47078 Query 160 AGGAGCGTCGCCATATTCAAGAGATAATAACGGCGGACGCCGTAGACTTTGCCGTGATCG 219 | ||| || |||||||| ||| |||| ||||||||| ||||| || |||| Sbjct 47077 ATGAGTTGAATCACATTCAAGAAATAGTAACAGCGGACGCCACCACATTTGCGGTCATCG 47018 Query 220 GCAATGAAGTAGGTGACAGTGGGACACCGCATCTTCAAGGATTTCTGAATATGAAAACAA 279 | |||||||| || | ||| || || ||||| ||||| ||| | || |||||||| | Sbjct 47017 AGAGAGAAGTAGGGGAAAATGGCACGCCTCATCTACAAGGTTTTATTAACATGAAAACGA 46958 Query 280 A 280 | Sbjct 46957 A 46957 >seq1622 Length=22383 Score = 255 bits (282), Expect = 7e-65 Identities = 493/712 (69%), Gaps = 29/712 (4%) Strand=Plus/Plus Query 1261 TTAAATCCGGTTTCTGAATAAGACGTAGTATTTGATAATTAGTTTGTACCCGATTG---C 1317 ||| || | |||||||||||| || ||||| ||||| || || ||||| ||| | | Sbjct 10682 TTATATACAGTTTCTGAATAACACATAGTACTTGATGATCAGCTTGTATGAGATGGTGCC 10741 Query 1318 AGAAGGGGCCCCGGTGTTTGAAGGTAACCATATTTTGAGCCCGTAATGAGGTACGCCGTC 1377 | | || | | | | | || | ||||||||| | ||||| || ||||| || Sbjct 10742 TGTAAGG---CTAGCGCTAGGTGGCAGCCATATTTTCAAGCCGTAGTGGGGTACAGAATC 10798 Query 1378 GTGTACTGTGTTAATCCATGCACCGGATCGAATATTCAGAAATCCGTAGTT---GGTAGA 1434 || | || ||||||||||| || || |||||| || || ||||| ||||| Sbjct 10799 ATGAATCTCATTTATCCATGCACCAGAGTTAACATTCAGGAAGCCATAGTTTGATGTAGA 10858 Query 1435 GGCGGAAGACTTGTAAATTTCAATATTGGGACGAGGAGTAAAGATCCTAATATGTGTCCT 1494 ||| ||| ||||||||||||||||| || | || || || || || || || | ||| Sbjct 10859 GGC---AGATTTGTAAATTTCAATATTAGGCCTGGGTGTGAAAATTCTTATGTGAGGCCT 10915 Query 1495 GTTCGAAATAAACATTTTTCTAGAGGAGTAGTCCTTAAACGGATCTGCAG-TGCTAGTAG 1553 ||| || ||||||||||| || ||||| || || || || | | | ||| ||| Sbjct 10916 GTTGCTTATGAACATTTTTCTGGAAGAGTAATCTTTGAAAGGGTGGGTTGAAGCT-GTAC 10974 Query 1554 CCATGGTAGCGTCGTCGTAATCGACAGCTGTGCTACCGTAAAGGACCTTATCTCTGTCAG 1613 |||| ||||| || | |||| ||| | ||||| || || || | || Sbjct 10975 TGATGGAGGCGTCATCATGGTCGATGAATGTAGTCCCGTACAGTACTTTGTTGTATTCTC 11034 Query 1614 CGTTAATTGGAACGTTGTTGAATTCAGGCCACAGTTGCACGACAACTTTACTGATCTTAT 1673 ||| || || |||||||||||||| ||||| | ||| || |||||||| ||||| |||| Sbjct 11035 TGTTGATGGGGACGTTGTTGAATTCCGGCCATATTTGAACAACAACTTTTCTGATTTTAT 11094 Query 1674 AATAGTCCCAGTAGTTCTTT-GGATACGACACATCAGACAATAAGAAAACAATTCCCGAA 1732 | ||||||||||| | |||| || || || || | | |||| | ||| | Sbjct 11095 AGTAGTCCCAGTA-TCCTTTAGGGTATTGAACGTCGCTTAGGATGAAAGTGAGTCCGGTT 11153 Query 1733 GAGAGCCCGCTGGTAGCATTCCAGGTCAAATGATCGTGTTTGATAGCTCGTAAACGGAAG 1792 || | ||| | | | |||||||| | || || ||||| || |||| || | | Sbjct 11154 GATAAACCGTTAGATGTGTTCCAGGTGAGGTGCTCATGTTTTATGCCTCGATGTCGCATG 11213 Query 1793 TAGGAGTATCG--TCCTGTGTGTCGCCTTCTTCTGACGTACTTCCGTCGCCGCCATCCAC 1850 || |||||||| ||| ||||| ||| ||||||||||| ||||| | |||||||| Sbjct 11214 TATGAGTATCGGTTCC--AGTGTCTCCTCCTTCTGACGTAACGTCGTCGTCTCCATCCAC 11271 Query 1851 GTGAGCTCCGACGCCTTCCGGCTCGTC---GTCTGGCACGCCTTCTG-GGGAGGAGAAAT 1906 |||| | | |||| | || ||||| || || |||||||||| |||||||| ||| Sbjct 11272 GTGACCGCTGACGTCGTC---TTCGTCCATTTCCGGTACGCCTTCTGTGGGAGGAG-AAT 11327 Query 1907 CAATTAGTGACGCGTATATAA-CCGGAAGTGCCGCAGTGACTGCCTAGTATT 1957 |||||||||||| ||||| || || |||| ||||||||||||||||||| Sbjct 11328 CAATTAGTGACGTGTATAAAATCCAAGCGTGCTGCAGTGACTGCCTAGTATT 11379 >seq964 Length=25708 Score = 89.7 bits (98), Expect = 6e-15 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 241 GGACACCGCATCTTCAAGGATTTCTGAATATGAAAACAAAACGTCGGCTGGGAACTATGA 300 |||| || |||||||| || ||| | ||||||||||||||| | | || || ||| Sbjct 3548 GGACGCCTCATCTTCAGGGGTTTGTCAATATGAAAACAAAAAGGAGAATGTCTACATTGA 3489 Query 301 AAAAGTGGTTTAACGCTAGAGCTCACTACGAGGCCGCTAAAGGCACGGATCTACAAAACG 360 |||| ||||| | | ||||||||||||||| | ||| ||| | |||| ||| |||| Sbjct 3488 AAAACTGGTTGAGCCGTAGAGCTCACTACGAAGTATCTAGAGGAAAAGATCAACAGAACG 3429 Query 361 ACGAATACTGCA 372 | ||||| |||| Sbjct 3428 ATGAATATTGCA 3417 >seq264 Length=776633 Score = 89.7 bits (98), Expect = 6e-15 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 241 GGACACCGCATCTTCAAGGATTTCTGAATATGAAAACAAAACGTCGGCTGGGAACTATGA 300 |||| || |||||||| || ||| | ||||||||||||||| | | || || ||| Sbjct 234786 GGACGCCTCATCTTCAGGGGTTTGTCAATATGAAAACAAAAAGGAGAATGTCTACATTGA 234727 Query 301 AAAAGTGGTTTAACGCTAGAGCTCACTACGAGGCCGCTAAAGGCACGGATCTACAAAACG 360 |||| ||||| | | ||||||||||||||| | ||| ||| | |||| ||| |||| Sbjct 234726 AAAACTGGTTGAGCCGTAGAGCTCACTACGAAGTATCTAGAGGAAAAGATCAACAGAACG 234667 Query 361 ACGAATACTGCA 372 | ||||| |||| Sbjct 234666 ATGAATATTGCA 234655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6152986847604