Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_025824.1 Length=6408 Score E Sequences producing significant alignments: (Bits) Value seq295602 259 2e-65 seq213072 250 1e-62 seq279942 223 1e-54 seq138774 131 7e-27 >seq295602 Length=499 Score = 259 bits (286), Expect = 2e-65 Identities = 154/157 (98%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 4009 CCAACCTAAGCCGGAGGTTAAAAAGGTAGTCTCTCAGACCTATGATTTTGATAAATTCAC 4068 ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 28 CCAAC-TAAGCCGGAGGTTAAAA-GGTAGTCTCTCAGACCTATGATTT-GATAAATTCAC 84 Query 4069 TATTGACTCTTCTCAGCGTCTTAATCTAAGCTATCGCTATGTTTTCAAGGATTCTAAGGG 4128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 85 TATTGACTCTTCTCAGCGTCTTAATCTAAGCTATCGCTATGTTTTCAAGGATTCTAAGGG 144 Query 4129 AAAATTAATTAATAGCGACGATTTACAGAAGCAAGGT 4165 ||||||||||||||||||||||||||||||||||||| Sbjct 145 AAAATTAATTAATAGCGACGATTTACAGAAGCAAGGT 181 >seq213072 Length=511 Score = 250 bits (276), Expect = 1e-62 Identities = 144/148 (97%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 3001 GGCTTAACTCAATTCTTGTGGGTTATCTCTCTGATATTAGCGCACAATTACCCTCTGATT 3060 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 27 GGCTTAACTCAATTCTTGTGGGTTATCTCTCTGATATTAGCGCTCAATTACCCTCTGACT 86 Query 3061 TTGTTCAGGGCGTTCAGTTAATTCTCCCGTCTAATGCGCTTCCCTGTTTTTATGTTATTC 3120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 87 TTGTTCAGGGTGTTCAGTTAATTCTCCCGTCTAATGCGCTTCCCTGTTTTTATGTTATTC 146 Query 3121 TCTCTGTAAAGGCTGCTATTTTCATTTT 3148 ||||||||||||||||||||||||| || Sbjct 147 TCTCTGTAAAGGCTGCTATTTTCATCTT 174 >seq279942 Length=488 Score = 223 bits (246), Expect = 1e-54 Identities = 131/135 (97%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 2001 TTCTCTTGAGGAGTCTCAGCCTCTTAATACTTTCATGTTTCAGAATAATAGGTTCCGAAA 2060 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 29 TTCTCTTGAGGAGTCTCAGCCTCTTAATACTTTCATGTTTCAGAATAATAGGTTCCGAAA 88 Query 2061 TAGGCAGGGTGCATTAACTGTTTATACGGGCACTGTTACTCAAGGCACTGACCCCGTTAA 2120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 89 TAGGCAGGGGGCATTAACTGTTTATACGGGCACTGTTACTCAAGGCACTGACCCCGTTAA 148 Query 2121 AACTTATTACCAGTA 2135 ||||| | | ||||| Sbjct 149 AACTT-TCATCAGTA 162 >seq138774 Length=249 Score = 131 bits (144), Expect = 7e-27 Identities = 78/82 (95%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 1002 CCAGCGTATGCGCCTGGTCTGTACACCGTGCATCTGTCCTCGTTCAAAGTTGGTCAGTTC 1061 ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 29 CCAGCCTATGCGCCTGGTCTGTACACCGTTCATCTGTCCTCTTTCAAAGTTGGTCAGTTC 88 Query 1062 GGTTCTCTTATGATTGACCGTC 1083 ||||| |||||||||||||||| Sbjct 89 GGTTCCCTTATGATTGACCGTC 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20292351665616