Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_023874.1 Length=1790 Score E Sequences producing significant alignments: (Bits) Value seq2073 77.0 4e-11 >seq2073 Length=11458 Score = 77.0 bits (84), Expect = 4e-11 Identities = 102/142 (72%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 725 TATTATAAACCCAGAGGAGAATGGTGGGACGGCTACATGCAGCAAACGTCTGTTATTATA 784 ||||| || | || || || |||||||| || ||| || ||| | ||| || || Sbjct 5378 TATTACAAGTCGAGGGGTGAGTGGTGGGATGGATACGTGGGGCAGGAGGATGTGATCATT 5437 Query 785 GATGACTTCTATGGCTGGATAAAATACGATGAACTGCTGAAAATATGTGACAGATACCCA 844 ||||| ||||| || ||| | |||||||||||||| || || || ||| | || || Sbjct 5438 GATGATTTCTACGGATGGCTGAAATACGATGAACTTCTACGTATCTGCGACCGCTATCCG 5497 Query 845 CACAAGGTTCCAATAAAAGGAG 866 ||| |||||| || ||||||| Sbjct 5498 CACCGGGTTCCTATTAAAGGAG 5519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5619016529608