Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10] 232,155 sequences; 2,966,890,203 total letters Query= NC_023421.1 Length=1378 Score E Sequences producing significant alignments: (Bits) Value seq11 77.0 3e-11 >seq11 Length=93888508 Score = 77.0 bits (84), Expect = 3e-11 Identities = 134/186 (72%), Gaps = 7/186 (4%) Strand=Plus/Minus Query 535 CCACGTGACTGGAAAACGGAAGTACAC-GTGCTC-TGGGGCATCCCCGGCTGTGGCAAGT 592 || ||| ||| || || || || ||| |||||| |||| | ||| ||||||||||||| Sbjct 86483088 CCTCGTCACTTCAAGACTGACGT-CACAGTGCTCGTGGGTCCTCCT-GGCTGTGGCAAGT 86483031 Query 593 CCAGATATGCCCGAGAA-CAAGCACCAGAAGCCTACTACAAACCACGCGGCGAATGGTGG 651 | ||| ||||| ||| | | || | || |||||| | ||||| || |||||| Sbjct 86483030 CAAGACATGCCTCCGAAGCCTCCTGATGACGTCTTCTACAAGACCCGCGGTGATTGGTGG 86482971 Query 652 GACGGATACACCGGACAAGAGGAC-GTGATCCTGGATGATTTCTACGGCTGGTTGAAGTT 710 || || ||| || | ||| ||| ||||| | ||||| || || || |||||||||| Sbjct 86482970 GATGGTTACCATGGTC-AGAAGACAGTGATAATCGATGACTTTTATGGATGGTTGAAGTA 86482912 Query 711 CGACGA 716 |||||| Sbjct 86482911 CGACGA 86482906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4290191445120