Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_020206.1 Length=1719 Score E Sequences producing significant alignments: (Bits) Value seq1991 77.0 3e-11 >seq1991 Length=109347 Score = 77.0 bits (84), Expect = 3e-11 Identities = 102/142 (72%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 999 CCCCTTTTACTGGTACTTTGTATGGGTATCGGTCGCATATTTTTAGTAGTTCGTCCCATT 1058 ||||||| ||||| |||||| | ||||||| || || | || ||||| || ||| Sbjct 40367 CCCCTTTAACTGGAACTTTGCAAGGGTATCTATCACACACCCGTAAGAGTTCATCACATG 40426 Query 1059 TTATCCATCCGTAGAAGTCGTCTATTATGACGTTGTCTTGTTGGTGGTATCCGTCCCACC 1118 ||||| ||||| ||||| || || | ||| ||| || || |||||||||||||| Sbjct 40427 ACATCCAGCCGTAAAAGTCATCAATCACGACACAGTCATGGCCGTCGTATCCGTCCCACC 40486 Query 1119 ATTCTCCGCGTGGTTTGTAGTA 1140 | || || || |||||||| Sbjct 40487 AGGAACCACGAGGCTTGTAGTA 40508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5390208140670