Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_021707.2 Length=1855 Score E Sequences producing significant alignments: (Bits) Value seq1991 78.8 1e-11 >seq1991 Length=109347 Score = 78.8 bits (86), Expect = 1e-11 Identities = 103/143 (72%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 779 ACCTACTACAAGCCGCGTGGAGAATGGTGGGATGGATACACCGGACAACCGTGCGTTGTT 838 |||||||||||||| ||||| |||||||| |||||| ||| || || || || Sbjct 40511 ACCTACTACAAGCCTCGTGGTTCCTGGTGGGACGGATACGACGGCCATGACTGTGTCGTG 40452 Query 839 ATCGATGACTTCTACGGATGGATCAAATACGATGAGCTTCTCAAGATCTGCGACAGATAT 898 || |||||||| ||||| ||||| || ||||| || | | | || || ||||| Sbjct 40451 ATTGATGACTTTTACGGCTGGATGTCATGTGATGAACTCTTACGGGTGTGTGATAGATAC 40392 Query 899 CCTTACAGAGTCCCTGTCAAAGG 921 |||| || ||| || || ||||| Sbjct 40391 CCTTGCAAAGTTCCAGTTAAAGG 40369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5825263515822