Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_025824.1 Length=6408 Score E Sequences producing significant alignments: (Bits) Value seq15267 311 4e-81 >seq15267 Length=2499 Score = 311 bits (344), Expect = 4e-81 Identities = 189/199 (95%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 5489 ACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCG 5548 |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 2234 ACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGTGA-ACCG 2292 Query 5549 CTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCA 5608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2293 CTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCA 2352 Query 5609 CGTTCTCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGATCCCTTTAGGGTTCCGATTTA 5668 ||||| ||||||||||||||| ||||||| ||||||| ||| ||| ||||||||||||| Sbjct 2353 CGTTCGCCGGCTTTCCCCGTCTAGCTCTATTTCGGGGGCTCCTTTTTGGGTTCCGATTTA 2412 Query 5669 GTGCTTTACGGCACCTCGA 5687 ||||||||||||||||||| Sbjct 2413 GTGCTTTACGGCACCTCGA 2431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20384487879984