Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_001510.1
Length=5149
Score E
Sequences producing significant alignments: (Bits) Value
seq10 181 3e-42
>seq10
Length=39035891
Score = 181 bits (200), Expect = 3e-42
Identities = 261/365 (72%), Gaps = 10/365 (3%)
Strand=Plus/Plus
Query 1414 TAAACAGACAAGGAGGCAAAAGAAATACTGTTTTATTTCATGGACCAGCCAGCACAGGCA 1473
|||||| ||||| || ||||||||| || ||||||| | ||| | || || ||||| |
Sbjct 34329623 TAAACAAACAAGTGGGTAAAAGAAATGCTATTTTATTGCCTGGTCTGGCAAGAACAGGAA 34329682
Query 1474 AATCTATTATTGCACAAGCCATAGCACAAGCAGTTGGCAATGTTGGTTGCTATAATGCAG 1533
||||| | || | || || || || ||||| ||| |||||||||| || |||
Sbjct 34329683 AATCTCTAATAACTCAGAAGATTGCTCAGTTGGTTGGTAATATTGGTTGCTAAAACTCAG 34329742
Query 1534 CCAATGTAAACTTT-CCATTTAATGACTGTACCAACAAGAACTTGATTTGGGTAGAAGAA 1592
| ||||| |||||| |||||||||||||||||||| || ||||| ||||| || |||
Sbjct 34329743 CAAATGTCAACTTTTCCATTTAATGACTGTACCAATAAAAACTTAATTTG---AGTTGAA 34329799
Query 1593 GCTGGTAACTTTGGACAGCAAGTAAACCAGTTTAAAGCCATTTGCTCTGGTCAAACTATT 1652
|| || ||||||||||| |||| || ||||||| || || || |||| | |
Sbjct 34329800 GCAGGAAACTTTGGACAAGAAGTTAATTGGTTTAAACAAATCATGTCAGGACAAATTGTC 34329859
Query 1653 CGCATTGATCAAAAAGGAAAAGGCAGCAAACAGATTGAACCAACACCAGTCATCATGACC 1712
| |||||||||||||||||||| ||| |||||| |||| ||| |||||
Sbjct 34329860 CATATTGATCAAAAAGGAAAAGGTTTAAAAACAATTGAATCAAC-----TCACTATGACA 34329914
Query 1713 ACAAATGAGAACATTACAGTGGTCAGAATAGGCTGCGAAGAAAGACCAGAACACACTCAA 1772
|||||||| | || || ||| || ||| ||| |||||||| |||||| |
Sbjct 34329915 ACAAATGAAATGATCACCTAAGTCCAAACAGGTCATGAATTAAGACCAG-ACACACATAG 34329973
Query 1773 CCAAT 1777
|||||
Sbjct 34329974 CCAAT 34329978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16361130705000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |