Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_026815.1 Length=4613 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 6e-13 >seq2 Length=97923104 Score = 84.2 bits (92), Expect = 6e-13 Identities = 260/395 (66%), Gaps = 13/395 (3%) Strand=Plus/Minus Query 1156 CTAAAGTATGGAACCTAC-TTAA--AAATAATTCCATGAACCCATACAAAGTATTTCATG 1212 |||||||| || ||| |||| |||||||| | ||||| ||||| | || | Sbjct 81310729 CTAAAGTACATAAAATACCTTAAGGAAATAATTAAA---ACCCAGTAAAAGTGCTACAAG 81310673 Query 1213 CAATGATGTGCTGTCTAAACAAACAAATGGGCAAAAGAAACACAATCTTACTTTGTGGTC 1272 | || | || || || || | ||| ||||| |||||||| ||| | || || | Sbjct 81310672 CTATAACATGTTGCCTTAATATACAGATGGGAAAAAGAAATGTCATCCTCCTGCATGACC 81310613 Query 1273 CAGCAAGTACTGGAAAAAGCCTAATAGCACAAAAAAT--TGCTCAATTGGTTGGTAATGT 1330 ||||| ||| |||||| || | | || |||| || || |||||||| ||||| Sbjct 81310612 CAGCAGTTACAGGAAAAGCTCTTACTGTACGAAAAGGCATG-TCGGTTGGTTGGAAATGT 81310554 Query 1331 AGGATGCTACAATCCAAGCAATGTTAACTTTCCATTCAACGATTGTAGCAACAAAAACCT 1390 || | | | | | ||| || |||||||| || || || || ||||||||| Sbjct 81310553 TACTTGTTCCCAACTAGCTTGTGTAAATTTTCCATTTAATGACCATACCAGCAAAAACCT 81310494 Query 1391 AATATGGATAGAAGAAGCAGGAAACTTTGGAACTCAAGTAAACCAATTTAA--AGCAATC 1448 |||| ||||||||| || || ||||||| || ||| | |||| ||| | | | | Sbjct 81310493 CCTATGTGCAGAAGAAGCCGGCAATTTTGGAAAACATGTAGAACAATGTAAGTAACTACC 81310434 Query 1449 ATGAGTGGCCAAGCAATTAGACTAGACCAAAAAGGCAAAGGTAGCAAAACCATCGAACCA 1508 || | | ||||| | ||| | || ||| |||| |||| | |||||| | || Sbjct 81310433 ATCAAGGA--AAGCACTGAGAATTGATCAAGAAGGGAAAGCTTCTAAAACCGCCCGTCCT 81310376 Query 1509 ACTCCAGTTATAATGACAACAAATGAAGACATAAC 1543 | | || ||||| ||||||||||| | ||||| Sbjct 81310375 TCGCTAGGAATAATAGCAACAAATGAAAATATAAC 81310341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14648253747540