Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_028650.1 Length=4634 Score E Sequences producing significant alignments: (Bits) Value seq2 107 6e-20 >seq2 Length=97923104 Score = 107 bits (118), Expect = 6e-20 Identities = 183/259 (71%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 1290 AATAATATGAATCCaaaaaaaGTATTTCATGCAATTATGTGCTGTCTAAACAAACAGATG 1349 |||||| || ||| |||||| | || || || | || || || || | ||||||| Sbjct 81310703 AATAATTAAAACCCAGTAAAAGTGCTACAAGCTATAACATGTTGCCTTAATATACAGATG 81310644 Query 1350 GGAAAAAGAAACACAATTCTACTTTGTGGTCCAGCAAGTACAGGAAAA-AGCTTACTAGC 1408 ||||||||||| || || || || |||||| |||||||||| |||||| | Sbjct 81310643 GGAAAAAGAAATGTCATCCTCCTGCATGACCCAGCAGTTACAGGAAAAGCTCTTACT-GT 81310585 Query 1409 AC-AAAAAATAGCTCAGTTAGTTGGAAATGTAGGTTGCTACAACGCTAGC-AATGTAAAC 1466 || |||| | || ||| ||||||||||| ||| | | | ||||| |||||| Sbjct 81310584 ACGAAAAGGCATGTCGGTTGGTTGGAAATGTTACTTGTTCCCA-ACTAGCTTGTGTAAAT 81310526 Query 1467 TTTCCATTCAATGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAACTTT 1526 |||||||| ||||| || || ||||||||| |||| ||||||||| || || ||| Sbjct 81310525 TTTCCATTTAATGACCATACCAGCAAAAACCTCCTATGTGCAGAAGAAGCCGGCAATTTT 81310466 Query 1527 GGAACTCAAGTAAACCAAT 1545 |||| || ||| | |||| Sbjct 81310465 GGAAAACATGTAGAACAAT 81310447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14715447572070