Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= NC_022104.1 Length=5403 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 3e-12 >seq5 Length=100893473 Score = 82.4 bits (90), Expect = 3e-12 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 1367 CCTTCTTATGGCTGCGTGAATTGGACCAATCAGAACTTTCCATTCAATGACTGTCACTGC 1426 |||| || ||||| || |||||||||||| |||||||||| ||||| |||| | Sbjct 61370389 CCTTTCTACGGCTGTGTAAATTGGACCAATGAGAACTTTCCCTTCAACAACTGCTTCGAT 61370448 Query 1427 CAGTCGCTGGTGTGGTGGGAGGAAGGGAGGATGACTGAAAATATTGTGGAGGTGGCAAAA 1486 || ||| | |||||||||| |||| |||||| | || | |||||| || ||| Sbjct 61370449 AAGATGCTCATCTGGTGGGAGGCGGGGAAGATGACGGCCAAGGTCGTGGAGCCCGCCAAA 61370508 Query 1487 GCAATCTTAGGTGGA 1501 || ||||| |||||| Sbjct 61370509 GCCATCTTCGGTGGA 61370523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17177158106240