Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Procavia_20capensis_20[genbank_20GCA_5F000152225.2_202014-12-16] 65,694 sequences; 3,602,182,911 total letters Query= NC_006148.1 Length=4432 Score E Sequences producing significant alignments: (Bits) Value seq519 111 4e-21 >seq519 Length=1696111 Score = 111 bits (122), Expect = 4e-21 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 2600 ATGGCTACAGGAGGAGGCGGTCCGATGGCAGACGATAACCAGGGCGCCGAGGGAGTGGGT 2659 |||||| |||| || ||| || |||| ||| | |||||||| ||||| ||||||| Sbjct 241675 ATGGCTTCAGGTGGTGGCACACCACTGGCCGACAACAACCAGGGTGCCGATGGAGTGGAC 241734 Query 2660 AATTCCTCAGGTGATTGGCATTGCGATACCAAGTGGATGGGAGACCACGTCATTACAAAG 2719 | ||||||||| |||||||||||||| ||| || ||||||||| ||||| || ||| Sbjct 241735 ATTTCCTCAGGCAATTGGCATTGCGATTCCACACGGTTGGGAGACCGAGTCATCACCAAG 241794 Query 2720 TCAACCAGAACTTGGGTGCTCCCCAC 2745 || ||| | || ||||| | ||||| Sbjct 241795 TCTACCTGCACCTGGGTATTGCCCAC 241820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14060290021870