Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Procavia_20capensis_20[genbank_20GCA_5F000152225.2_202014-12-16] 65,694 sequences; 3,602,182,911 total letters Query= NC_024453.2 Length=5153 Score E Sequences producing significant alignments: (Bits) Value seq3673 82.4 2e-12 >seq3673 Length=216134 Score = 82.4 bits (90), Expect = 2e-12 Identities = 130/186 (70%), Gaps = 3/186 (2%) Strand=Plus/Minus Query 1451 GCCAGCACGGGGAAGACCAATCTGGCCAAGAGCATCGTGCAGGCCTGCAAGCTATACGGC 1510 |||| || || || ||||| |||| || |||||| || || | ||| ||||| Sbjct 107213 GCCATTACTGGAAAAACCAACATGGCTGAGGCCATCGTTCATGCTGTCCCGCTCTACGGA 107154 Query 1511 TGCGTGAACCATCAAAACAAGAACTTCGTCTTCAACGACTGCGCGGCCAAGCTGATCGTG 1570 ||| | ||| | |||||||||||| ||||| |||||||| || |||| || | ||| Sbjct 107153 TGCATTAACTGGCCCAACAAGAACTTCCCCTTCAGCGACTGCGTGGACAAGGTGGTGGTG 107094 Query 1571 TGGTGGGAAGAAGCGCTGATGCACAATGACTGGGTGGAACAGGCCAAGTGCATCCTGGGA 1630 |||||||| |||| ||| ||| | |||||| ||||||| ||| ||||| Sbjct 107093 TGGTGGGAGGAAGGAAAAATGACCAAGG---TGGTGGAGTCGGCCAAGGCCATTCTGGGT 107037 Query 1631 GGAACC 1636 ||| || Sbjct 107036 GGATCC 107031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16365832233780