Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callithrix_20jacchus_20[refseq_20GCF_5F000004665.1_202010-01-22] 14,205 sequences; 2,914,958,544 total letters Query= NC_003287.2 Length=6407 Score E Sequences producing significant alignments: (Bits) Value seq1334 423 8e-115 seq1004 408 2e-110 seq274 358 3e-95 seq2078 291 3e-75 seq1 260 6e-66 seq699 165 3e-37 seq2190 152 2e-33 seq1556 152 2e-33 seq2049 150 7e-33 seq1721 122 4e-24 seq2147 109 2e-20 seq2902 98.7 4e-17 seq2320 93.3 2e-15 seq2189 87.8 7e-14 seq1820 78.8 4e-11 >seq1334 Length=132174527 Score = 423 bits (468), Expect = 8e-115 Identities = 341/408 (84%), Gaps = 3/408 (1%) Strand=Plus/Minus Query 5488 ACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCG 5547 |||||||||||| || || |||||| |||||||| ||||||||||||||||||| Sbjct 124548528 ACGCGCCCTGTAATCCCGTATATGGCGCGGTGGGTGTGGAGGTTACGCGCAGCGTGACCA 124548469 Query 5548 CTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCA 5607 ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| Sbjct 124548468 CTACACTTGCCAGCGCCCTAGAGCCCGCTCCTTTCGCTTTCATCCCTTCCTTTCTAGCCA 124548409 Query 5608 CGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTA 5667 || |||| |||||| |||| |||| |||||||||||||||||||||| || ||| ||||| Sbjct 124548408 CGCTCGCAGGCTTTACCCGGCAAGGTCTAAATCGGGGGCTCCCTTTATGGATCCCATTTA 124548349 Query 5668 GTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTTGGGTGATGGTTCACGTAGTGGGC 5727 ||||||||||||| ||||||||||||||||||||| | || |||||| |||||||||| Sbjct 124548348 ATGCTTTACGGCACGTCGACCCCAAAAAACTTGATTACGTTGTTGGTTCCCGTAGTGGGC 124548289 Query 5728 CATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATAGTG 5787 | ||||||||| ||||| |||| ||| ||||||||||||| |||| | || |||||| Sbjct 124548288 TACCGCCCTGATGGACGGCCTTTCCTCCTGTGACGTTGGAGTCAACGTACCTTGATAGTG 124548229 Query 5788 GACTCTTGTTCCAAACTGGAACAACACTCAACCCTAT-CTCGGGCTATTCTTTTGATTTA 5846 ||||| ||| | | |||||||||| |||| ||| | ||| || |||||||||||| Sbjct 124548228 GACTCATGTCTCCTGCAGGAACAACACACAACAATATCCCCGGTCTGTTCTTTTGATTTG 124548169 Query 5847 TAAGGGA-TTTTGCCG-ATTTCGGCCTATTGGTTAAAAAATGAGCTGA 5892 ||| ||| | | |||| || ||||| |||| |||||| |||||||| Sbjct 124548168 TAAAGGAGTCTAGCCGAATCTCGGCAGCTTGGGTAAAAACTGAGCTGA 124548121 Score = 324 bits (358), Expect = 6e-85 Identities = 272/322 (84%), Gaps = 9/322 (3%) Strand=Plus/Minus Query 5597 CTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGG 5656 ||||||| || || ||||||||||||||||| |||||||||| |||| |||| || | Sbjct 92702746 CTTTCTCCCC-CGGTCGCCGGCTTTCCCCGTGG-GCTCTAAATCCCGGGCGCCCTGTACG 92702689 Query 5657 GTTCCGATTTAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTTGGGTGATGGTTC 5716 ||||| ||||| |||||||||||| |||||| || || |||||| ||| |||||||| Sbjct 92702688 GTTCCTATTTATTGCTTTACGGCATCTCGACAACAGCCAAGTTGATTAGGGCGATGGTTC 92702629 Query 5717 ACGT-AGTGGGCCATCGCC-CTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACG 5774 |||| || ||||| || || |||||||||||||| |||| |||||||||| || |||||| Sbjct 92702628 ACGTAAGAGGGCCGTCCCCTCTGATAGACGGTTTCTCGCTCTTTGACGTTCGAATCCACG 92702569 Query 5775 TTCTTTAATAGTGGA-CTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGGCTA 5833 ||| ||||||||| | ||||||| |||||||||||||||||| |||||||||| | ||| Sbjct 92702568 TTCGTTAATAGTGCAGTTCTTGTTTCAAACTGGAACAACACTCTACCCTATCTCCGCCTA 92702509 Query 5834 TTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAG-CTGA 5892 ||||| | |||||| ||||||||||||||||||||||| ||||| ||||||||| || | Sbjct 92702508 TTCTTCTCATTTAT-AGGGATTTTGCCGATTTCGGCCTCATGGTT-AAAAATGAGTCTCA 92702451 Query 5893 TTTAACAAAAATTTAACGCGAA 5914 ||| | ||||||||||||||| Sbjct 92702450 TTT-AGGAAAATTTAACGCGAA 92702430 Score = 253 bits (280), Expect = 8e-64 Identities = 223/278 (80%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 5530 TTACGCGCAGCGTGACCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCT 5589 |||||| ||| ||||| | || |||| |||| |||| ||| ||||||||| || ||| Sbjct 43091209 TTACGCTCAGTATGACCACGACTTTTGCTAGCGTCCTATGGCCTGCTCCTTTCACTATCT 43091268 Query 5590 TCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCC 5649 ||||||||||| ||||||||| |||||||||||| |||| |||| || |||| | Sbjct 43091269 ACCCTTCCTTTCACGCCACGTTATTCGGCTTTCCCCGACAAGATCTACTTCCATGGCTAC 43091328 Query 5650 CTTTAGGGTTCCGATTTAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTTGGGTG 5709 |||| || ||| ||||| |||| || ||| ||||||||| ||||||| |||| || | Sbjct 43091329 CTTTGTGGCTCCAATTTAAGGCTTAACCGCATCTCGACCCCGAAAAACTAGATTAAGGCG 43091388 Query 5710 ATGGTTCACGTAGTGGGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGT 5769 |||||||||||| ||||||| ||||||||| | | ||||||||||||||| ||||||| Sbjct 43091389 ATGGTTCACGTATTGGGCCACTGCCCTGATACTCTGATTTTCGCCCTTTGACATTGGAGT 43091448 Query 5770 CCACGTTCTTTAATAGTGGACTCTTGTTCCAAACTGGA 5807 ||||||||||||||| ||| || |||||| |||||| Sbjct 43091449 TCACGTTCTTTAATAGGGGAATCCTGTTCCTCACTGGA 43091486 >seq1004 Length=155834243 Score = 408 bits (452), Expect = 2e-110 Identities = 292/333 (88%), Gaps = 2/333 (1%) Strand=Plus/Minus Query 5571 CCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAA 5630 || ||||||||||||||| ||||||||||| ||| ||| || |||||||||||| |||| Sbjct 148132891 CCAGCTCCTTTCGCTTTCATCCCTTCCTTTTCCGCAACGGTCCCCGGCTTTCCCCATCAA 148132832 Query 5631 GCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACCTCGACCCC 5690 | || || | ||||||||| | ||||| |||||||||||||||| | ||| ||||||||| Sbjct 148132831 GATCCAAGTGGGGGGCTCCGTGTAGGGGTCCGATTTAGTGCTTTGCTGCAGCTCGACCCC 148132772 Query 5691 AAAAAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGACGGTTTTT 5750 ||| || ||||| |||||||||||||||| |||||||||||||||| |||||| |||| Sbjct 148132771 GAAATACATGATTAAGGTGATGGTTCACGTATTGGGCCATCGCCCTGAGAGACGGATTTT 148132712 Query 5751 CGCCCTTTGACGTTGGAGTCCACGTTCTTTAATAGTGGACTCTTGTTCCAAACTGGAACA 5810 |||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||| Sbjct 148132711 CGCCCTTTGATGTTGGAGTCCACGTTCTTTAATAGTGAACTCTTGATCCAAACAGGAACA 148132652 Query 5811 ACACTCAACCCTATCTCGGGCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCC 5870 |||||| | |||||||||| | | |||||||||||||||||||||||||| ||||||||| Sbjct 148132651 ACACTCGATCCTATCTCGGTC-AATCTTTTGATTTATAAGGGATTTTGCCCATTTCGGCC 148132593 Query 5871 TATTGGTTAAAAAATGAGCTGATTTAACAAAAA 5903 ||||||| |||| ||||| |||||||| |||| Sbjct 148132592 GATTGGTT-AAAATTGAGCCGATTTAACGAAAA 148132561 Score = 275 bits (304), Expect = 3e-70 Identities = 237/284 (83%), Gaps = 7/284 (2%) Strand=Plus/Minus Query 5617 GCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTAGTGCTTTAC 5676 |||||||||| |||||||| | ||| |||||||||||| |||||| |||||||||||||| Sbjct 59369640 GCTTTCCCCGACAAGCTCTGA-TCGCGGGCTCCCTTTAAGGTTCCTATTTAGTGCTTTAC 59369582 Query 5677 GGCACCTCGACCCCAAAAAACTTGATTTGGGTGATGGTTCACGT-AGTGGGCCAT-CGCC 5734 ||| |||||||| |||||| ||||| ||| |||||||||||| |||| ||||| | || Sbjct 59369581 GGCCCCTCGACCGCAAAAA-CTTGACATGGC-GATGGTTCACGTCAGTGCGCCATTCCCC 59369524 Query 5735 CTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTT-CTTTAATAGTGGACTCT 5793 ||||||||||||||| |||||||||| |||||| | || ||| ||||| ||||| | ||| Sbjct 59369523 CTGATAGACGGTTTTCCGCCCTTTGAAGTTGGAATTCATGTTTCTTTATTAGTGTATTCT 59369464 Query 5794 TGTTCCAAACTGGAA-CAACACTCAACCCTATCTCGGGCTATTCTTTTGATTTATAAGGG 5852 |||||| ||| | | | | || || |||||||| || |||||||||||||||| || Sbjct 59369463 TGTTCCCTCCTGTCATCTATATTCTTCCTTATCTCGGACTTTTCTTTTGATTTATAAAGG 59369404 Query 5853 ATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGATTTA 5896 |||||| |||||| |||||| ||| |||||||||| ||||||| Sbjct 59369403 ATTTTGTCGATTTTGGCCTACTGGGCAAAAAATGAGTTGATTTA 59369360 Score = 275 bits (304), Expect = 3e-70 Identities = 243/298 (82%), Gaps = 4/298 (1%) Strand=Plus/Plus Query 5504 CGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCGCTACACTTGCCAGCGC 5563 ||||| || ||| || ||| || | || | |||| |||| ||||| |||||| || ||| Sbjct 152743290 CGCATAAATCGCCGCCCGTGGGGCGTTTGCTCGCATCGTGTCCGCTTCACTTGGCACCGC 152743349 Query 5564 CCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCC 5623 || ||| |||| ||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 152743350 CCGAGCTCCCGGTCCATTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCGACGGCTTTCC 152743409 Query 5624 CCGTCAAGCTC-TAAATCGGGGGCTCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACC 5682 ||| |||||| || | |||||||||||||||| |||||||||| |||||||||||||| Sbjct 152743410 CCGCTAAGCTCTTACCTTGGGGGCTCCCTTTAGGTTTCCGATTTATTGCTTTACGGCACC 152743469 Query 5683 TCGACCCCAAAAAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGA 5742 || ||||| || ||||||| ||||||||||| | | ||| |||| |||| ||| | Sbjct 152743470 TCCACCCCGAATTTCTTGATTATGGTGATGGTTCTCTTTGTGTTTCATCACCCTTATATA 152743529 Query 5743 C-GGTTTTTCGCCCTTTGACGTTGGAG-TCCACGTTCTTTAATAGTG-GACTCTTGTT 5797 | || ||||||||||||||||||||| ||||| || | |||||| | || |||||| Sbjct 152743530 CTGGCATTTCGCCCTTTGACGTTGGAGTTCCACATTTTCTAATAGCGATACACTTGTT 152743587 >seq274 Length=204313951 Score = 358 bits (396), Expect = 3e-95 Identities = 273/319 (86%), Gaps = 3/319 (1%) Strand=Plus/Minus Query 5490 GCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCGCT 5549 |||||||||||||| ||||||||||||| || ||| |||||| ||||| |||||||| | Sbjct 109729238 GCGCCCTGTAGCGGTGCATTAAGCGCGGTTGGAGTGATGGTTAAGCGCAACGTGACCGTT 109729179 Query 5550 ACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACG 5609 ||||||||||| |||||| | |||||||||||||||| ||||||||| ||||||| |||| Sbjct 109729178 ACACTTGCCAGTGCCCTATCCCCCGCTCCTTTCGCTTACTTCCCTTCTTTTCTCGGCACG 109729119 Query 5610 TTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTAGT 5669 ||||||||||||||||| ||||||||| || ||||||||| |||||| ||| ||||| | Sbjct 109729118 TTCGCCGGCTTTCCCCGAGAAGCTCTAATTCAGGGGCTCCCATTAGGGCTCCAATTTATT 109729059 Query 5670 GCTTTACGGCACCTCGACCCCAAAAAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCA 5729 ||||||||| |||||||||| || ||||||||| | ||||||||| |||| |||||| Sbjct 109729058 GCTTTACGGAGCCTCGACCCCGAATAACTTGATTACGTTGATGGTTCCCGTATGGGGCCA 109728999 Query 5730 TCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAAT-AGTGG 5788 ||||||||| |||||||||||||| ||||| | || || ||| ||||| || ||||| Sbjct 109728998 TCGCCCTGA-CCCCGGTTTTTCGCCCTATGACGATAGATTCTACGGTCTTTTATAAGTGG 109728940 Query 5789 ACTCTTGTTCCAAACTGGA 5807 |||| |||| ||||||||| Sbjct 109728939 ACTCCTGTT-CAAACTGGA 109728922 Score = 159 bits (176), Expect = 1e-35 Identities = 148/184 (80%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 5491 CGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTAC-GCGCAG-CGTGACCGC 5548 ||||||| | ||||| | ||| || ||||||||| |||| | || ||| | ||| Sbjct 52456498 CGCCCTGGATCGGCGGTTAAAGTACGTAGGGTGTGGTCTTTACTGTTCAATCGTTATCGC 52456439 Query 5549 TACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCAC 5608 | ||||||| |||||| || ||||||||||||||| |||| |||||||||||| |||||| Sbjct 52456438 TGCACTTGCAAGCGCCGTAACGCCCGCTCCTTTCGGTTTCATCCCTTCCTTTCACGCCAC 52456379 Query 5609 GTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTC-CCTTTAGGGTTCCGATTTA 5667 |||||||||||||| ||||| ||| |||| | | || ||| |||||||| |||||||| | Sbjct 52456378 GTTCGCCGGCTTTCGCCGTCGAGCGCTAAGTGGTGGCCTCTCCTTTAGGATTCCGATTCA 52456319 Query 5668 GTGC 5671 ||| Sbjct 52456318 TTGC 52456315 Score = 102 bits (112), Expect = 3e-18 Identities = 106/134 (79%), Gaps = 4/134 (3%) Strand=Plus/Plus Query 5785 GTGGACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGG-CTATTCTTTTGAT 5843 || || ||| ||| || |||||| |||| ||| | |||||||| || |||| || | ||| Sbjct 59079198 GTTGAATCTAGTTACATACTGGATCAACTCTCTAGCCTATCTCAGGTCTATGCTCTCGAT 59079257 Query 5844 TTATAAGGGATTTT-GCCGATTTCGGC-CTATTGGTTAAAAAATGAGCTGATTTAACAAA 5901 ||||||||||| | ||||| ||| | |||||||| || | |||||||||||||| || Sbjct 59079258 CTATAAGGGATTCTCGCCGACTTCCGTGCTATTGGT-AAGAGATGAGCTGATTTAAACAA 59079316 Query 5902 AATTTAACGCGAAT 5915 ||||| | |||||| Sbjct 59079317 AATTTTATGCGAAT 59079330 >seq2078 Length=44557958 Score = 291 bits (322), Expect = 3e-75 Identities = 212/242 (88%), Gaps = 3/242 (1%) Strand=Plus/Minus Query 5677 GGCACCTCGACCCCAAAAAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCATCGCCCT 5736 |||||||| ||||| ||||||||||| || |||||| || |||| |||| ||| ||||| Sbjct 39221072 GGCACCTCCGCCCCACAAAACTTGATTAGGATGATGGCTCGCGTACTGGGGCATAGCCCT 39221013 Query 5737 GATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATAGTGGACTCTTGT 5796 |||| || ||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct 39221012 GATACACCGTTTTTCGCCCATTGACAGTGCAGTCCACGTTCTTTAATAGTGGACTCTTGT 39220953 Query 5797 TCCAAACTGGAACAACACTCAA-CCCTATCTCGGGCTATTCTTTTGATTTATAAGGGATT 5855 ||| ||||||||||| ||| || ||||||||||| ||||||||||||| |||| || || Sbjct 39220952 TCCTAACTGGAACAAGACTAAACCCCTATCTCGGTCTATTCTTTTGATCTATACCGGCTT 39220893 Query 5856 TTGCCGATTT-CGGCCTATT-GGTTAAAAAATGAGCTGATTTAACAAAAATTTAACGCGA 5913 |||||||||| ||||||||| || |||||||||||||||||| |||||||||||||||| Sbjct 39220892 TTGCCGATTTCCGGCCTATTGGGCAAAAAAATGAGCTGATTTATCAAAAATTTAACGCGA 39220833 Query 5914 AT 5915 || Sbjct 39220832 AT 39220831 >seq1 Length=210400635 Score = 260 bits (288), Expect = 6e-66 Identities = 210/241 (87%), Gaps = 12/241 (5%) Strand=Plus/Minus Query 5686 ACCCCAAAAAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGACGG 5745 |||||||||||||||||| ||||| ||||||||| |||||||||||||||||||| || Sbjct 178894771 ACCCCAAAAAACTTGATTACGGTGAATGTTCACGTATTGGGCCATCGCCCTGATAGATGG 178894712 Query 5746 TTTTTCGCCCTTTGACGTTGGAGTCCAC-GTTCTTTAATAGTGGACTC-TTGTTCCAAAC 5803 | | |||||||||||||||||||||| ||||||| | |||||| || ||||||||||| Sbjct 178894711 ATATCTGCCCTTTGACGTTGGAGTCCACGGTTCTTT-AGAGTGGAGTCTTTGTTCCAAAC 178894653 Query 5804 TGGAACAACACTCAACCCTATCTCGGGCTATTC-TTTTGATTTATAAGGG--ATTTTGCC 5860 |||||||||| ||||| ||||||||| |||||| |||||||||||||||| ||||||| Sbjct 178894652 TGGAACAACATTCAACTCTATCTCGGTCTATTCTTTTTGATTTATAAGGGGATTTTTGCC 178894593 Query 5861 GATTTCGG-CCTATT-GGTTAAAAAAT-GAGCT-GATTTAA--CAAAAATTTAACGCGAA 5914 |||||||| |||||| |||||| |||| ||||| ||||||| ||||||||| |||||| Sbjct 178894592 GATTTCGGTCCTATTGGGTTAATAAATGGAGCTGGATTTAAATAAAAAATTTACCGCGAA 178894533 Query 5915 T 5915 | Sbjct 178894532 T 178894532 Score = 86.0 bits (94), Expect = 3e-13 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 5809 CAACACTCAACCCTATCTCGGGCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGG 5868 || ||||| | |||||| | |||| || || |||||| ||||| |||||| | | | Sbjct 67098585 CATCACTCCGCGCTATCTGTGAGGATTCCTTGGACTTATAACGGATTATGCCGAGTGCTG 67098644 Query 5869 CCTATTGGTTAAAAAATGAGCTGATTTAACAAAAATTTAACGCGAAT 5915 ||||||||||||| ||||| ||||| || | ||| ||||||||||| Sbjct 67098645 CCTATTGGTTAAACAATGATCTGATATAGCGCAAACTTAACGCGAAT 67098691 Score = 78.8 bits (86), Expect = 4e-11 Identities = 97/129 (75%), Gaps = 13/129 (10%) Strand=Plus/Minus Query 5775 TTCTTTAATAGTGGACTCTTGTTCCAAACTGGAACAA--CACTCAACCC---TATCTCGG 5829 |||||| |||||| || | ||||| ||||| | ||| | |||| |||| ||| Sbjct 148378856 TTCTTTCATAGTGTACACATGTTC-----TGGAAGTAACCACCCGACCCCCCTATCACGG 148378802 Query 5830 GCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGC 5889 |||||||| || |||||||||||||| ||| ||| | ||| ||||||||| |||| | Sbjct 148378801 -CTATTCTTCTGGTTTATAAGGGATTT--GCGAGTTCTGTCTACTGGTTAAAACATGAAC 148378745 Query 5890 TGATTTAAC 5898 ||| ||||| Sbjct 148378744 TGAGTTAAC 148378736 >seq699 Length=159171411 Score = 165 bits (182), Expect = 3e-37 Identities = 124/142 (87%), Gaps = 3/142 (2%) Strand=Plus/Plus Query 5758 TGACGTTGGAGTCCACGTTCTTTAATAGTGGACTCTTGTTCCAAACTGGAACAACACTCA 5817 |||||||||||||||||||||| | ||||||||||||||||||||||||| |||| | Sbjct 148514817 TGACGTTGGAGTCCACGTTCTTCA-TAGTGGACTCTTGTTCCAAACTGGATCAACTATTC 148514875 Query 5818 ACCCTATCTCGGGCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCCTATTGGT 5877 || ||||||||| |||| ||||||||| |||| |||||||||| ||| ||||||||| Sbjct 148514876 ACTCTATCTCGGTCTAT-CTTTTGATT-ATAACGGATTTTGCCCATTCTAGCCTATTGGC 148514933 Query 5878 TAAAAAATGAGCTGATTTAACA 5899 || ||||||||||||||||||| Sbjct 148514934 TATAAAATGAGCTGATTTAACA 148514955 Score = 120 bits (132), Expect = 1e-23 Identities = 277/408 (68%), Gaps = 11/408 (3%) Strand=Plus/Plus Query 5490 GCGCCCTGTAGCGGCGCATTAAGCG-CGGCGGGTGTGGTGGTTACGCGCAGCGTGACCGC 5548 |||||||| | |||| | |||| | || ||| ||||| ||||| || |||||| | Sbjct 73823833 GCGCCCTGAACAGGCGAAGTAAGGGGCGAAAAGTGGGGTGGATACGCAAAGTGTGACCAC 73823892 Query 5549 TACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCAC 5608 || |||||||||||| || | ||| | | |||| |||| ||||||||||||| || Sbjct 73823893 TAATCTTGCCAGCGCCGTAAGGACCGATAAGGTGGCTTACTTCGCTTCCTTTCTCGCAAC 73823952 Query 5609 GTTCGCCGGCTTTCCCCGTCAAGCTCT---AAATCGGGGGCTCCCTTTAGGGTTCCGATT 5665 || || |||||| || | | |||| |||| || ||||||||| |||||| Sbjct 73823953 GTAAAATAAGTTGCCCCGTTTAGATATAAAAAATAGGGG--TCACTTTAGGGTCCCGATT 73824010 Query 5666 TAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTTGGGTGATGGTTCACGTAGTGG 5725 | | | ||||| |||| |||| ||||||||| | | |||||| | | |||| Sbjct 73824011 AACAGGTATACGGAGCCTCTACCCAGGAAAACTTGAGTAAGTAGATGGTGATCATCGTGG 73824070 Query 5726 GCCATCGCCCTGATAGACGGTTTTTCGC-CCTTTGACGTTGGAGTCCACGTTCTTTAATA 5784 || ||| ||||||| |||| ||| ||||||| || | | | ||| ||||| | Sbjct 73824071 GCGTAGGCCATGATAGA-TGTTTGACGCATCTTTGACAAAGGCGGCAATGTTGTTTAAGA 73824129 Query 5785 GTGGACTCTTGTTCCAAACTGGAACAACACTCA-ACCCTATCTCGGGCTATTCTTTTGAT 5843 | || ||| | ||||| | |||| | |||| |||||||| || ||| Sbjct 73824130 TCAGCTAAGTGCTCC-GAGTGGAAATAGTCTCATGACATATC-AGGGCTATTGGTTAGAT 73824187 Query 5844 TTATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTG 5891 ||| || ||| || | ||||||| ||||| | | ||||| ||| ||| Sbjct 73824188 TTACAAAGGACTTCGGCGATTTCCGCCTAGTAGAGAAAAACTGATCTG 73824235 >seq2190 Length=49145316 Score = 152 bits (168), Expect = 2e-33 Identities = 123/142 (87%), Gaps = 5/142 (4%) Strand=Plus/Plus Query 5727 CCATCGCCCTGATAGACGG-TTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATAG 5785 |||||||||||| | |||| ||||||||||| |||| ||||||||||||||||| || Sbjct 41929884 CCATCGCCCTGAGACACGGCTTTTTCGCCCTGTGACTCTGGAGTCCACGTTCTTTCGGAG 41929943 Query 5786 TGGACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGGCTATT-CTTTTGA-T 5843 |||||||||| ||| ||||||| ||||||||||||||||||||||||| ||||||| | Sbjct 41929944 TGGACTCTTGATCCCGACTGGAA-GACACTCAACCCTATCTCGGGCTATTCCTTTTGATT 41930002 Query 5844 TTATAAG-GGATTTTGCCGATT 5864 ||||||| |||||||| |||| Sbjct 41930003 TTATAAGCGGATTTTGTTGATT 41930024 >seq1556 Length=121768101 Score = 152 bits (168), Expect = 2e-33 Identities = 137/166 (83%), Gaps = 6/166 (4%) Strand=Plus/Plus Query 5756 TTTGACGTTGGAGTCCACGTTCTTTAATAG-TGGACTCTTGTTCCAAACTGGAACAACAC 5814 |||||| || || ||||| || ||||||| || |||||||||||||| ||||||||| | Sbjct 37175011 TTTGACCTTTGATGCCACGGTCGTTAATAGATGTACTCTTGTTCCAAAGTGGAACAACTC 37175070 Query 5815 TCAACCCTATCTCGGGCTA-TTCTTTT--GATTTATAAGGGATTTTGCCGATTTCGGCCT 5871 ||| ||||||| ||| ||| |||||| |||||| | |||| ||||||||| ||| ||| Sbjct 37175071 TCAGCCCTATCACGGTCTAGGTCTTTTTGGATTTAGAGGGGACTTTGCCGATCTCGCCCT 37175130 Query 5872 ATTGGTTAA-AAAATGAGCTG-ATTTAACAAAAATTTAACGCGAAT 5915 ||||||||| |||| |||||| || |||| ||||| ||||||||| Sbjct 37175131 ATTGGTTAACAAAAGGAGCTGAATGAAACACAAATTAAACGCGAAT 37175176 >seq2049 Length=49578535 Score = 150 bits (166), Expect = 7e-33 Identities = 245/339 (72%), Gaps = 13/339 (4%) Strand=Plus/Minus Query 5586 TTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGG 5645 |||||| ||||||||| | | | | || ||||||| ||||| ||| | Sbjct 18827032 TTCTTCTCTTCCTTTCGCATGAAGGCAGGACGCGTTCCCCGGATCGCTCTTGATCCCTCG 18826973 Query 5646 CTCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACCTCGACCCCAAAAA-ACTTGATTT 5704 | |||||||| | | || || ||| ||||| ||||||| |||||||| ||| ||| | Sbjct 18826972 CCCCCTTTAGAGGAC-GAATTGGTGTTTTACAGCACCTCAACCCCAAACTGACTGGATAT 18826914 Query 5705 GGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTT 5764 | |||||| |||| || ||||||| |||||||| ||||||| || | || |||| Sbjct 18826913 GC-TGATGGATCACCTACTGGGCCAGCGCCCTGACAGACGGTGTTCCTGCCGTTGAGCGC 18826855 Query 5765 GGAGTCCACGTTCTTTAATAGTGG-ACTCTTGTTCCAAACTG--GAACAACACTCAA-CC 5820 ||||||| | ||||||||||| || | || |||||||||| | ||| ||| |||| || Sbjct 18826854 GGAGTCCCCCTTCTTTAATAGAGGCAGTCGTGTTCCAAACGGCTGAA-AACCGTCAAGCC 18826796 Query 5821 CTATCT-CGGGCTATTCTTTTGATTTATAAGGGATTTTGCC--GATTTCGGCCTATTGGT 5877 ||| || || ||||||| || || | || || |||||||| | | ||| |||||| Sbjct 18826795 CTAGCTCCGAGCTATTCGTTAGACTGATCTGGCATTTTGCCCTAGTGCCCGCCGATTGGT 18826736 Query 5878 TAAAAAATGAGCTGATTTAA-CAAAAAT-TTAACGCGAA 5914 | || ||| ||||||||| ||||||| ||| | |||| Sbjct 18826735 TTAAGTTTGATCTGATTTAACCAAAAATCTTACCTCGAA 18826697 Score = 80.6 bits (88), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 5/102 (5%) Strand=Plus/Plus Query 5516 GGCGGGTGTGGTGGTTACGCGCAGCGTGACCGCTACACTTGCCAGCGCCCTAGCGCCCGC 5575 |||||||| |||| | | || ||||||| ||| |||| ||||| |||| ||||| | Sbjct 18111569 GGCGGGTG--GTGGGTCC---CACCGTGACCAATACCCTTGACAGCGTCCTAACGCCCCC 18111623 Query 5576 TCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGG 5617 ||||| |||||||| ||||||||||| |||||||| ||| Sbjct 18111624 TCCTTAAGCTTTCTTACCTTCCTTTCTAAACACGTTCGACGG 18111665 >seq1721 Length=108792865 Score = 122 bits (134), Expect = 4e-24 Identities = 170/225 (76%), Gaps = 10/225 (4%) Strand=Plus/Plus Query 5694 AAACTTGATTTGGGTGATGGTTCACGTAGT-GGGCCATCGCCCTGATAGACGGTTTTTCG 5752 |||||||||| || |||||| |||| || | ||| |||||| |||| | |||| |||||| Sbjct 79757754 AAACTTGATTAGGATGATGGATCACATATTTGGGTCATCGCACTGAAAAACGGGTTTTCG 79757813 Query 5753 CCCTTTGACGTTGGAGT-CCACGTTCTTTAAT-AGTGGACT-CTTGTTCCAAACTGGAAC 5809 |||| ||||| | |||| || | || ||| |||| ||| |||| |||| | |||| | Sbjct 79757814 CCCTGTGACGATAGAGTTCCGCCCTCAGTAACCAGTGAACTTCTTGATCCAGAGTGGATC 79757873 Query 5810 AAC-ACTCAACCCTATCTCGGGC-TATTCTTTTGATTTATAAGGG-ATTTTGCCGATTT- 5865 ||| ||| | |||||||| || ||| | | |||| ||| |||| | ||| ||||||| Sbjct 79757874 AACGACTGAGTCCTATCTCATGCCTATGCCTATGATCTATTAGGGCAGTTTCCCGATTTT 79757933 Query 5866 CGGCCTATTGGTTAAAAAATGAGCTGAT-TTAACAAAAATTTAAC 5909 | || | | | ||||| |||||||||| | |||| || |||||| Sbjct 79757934 CTGCTGAGTAGGTAAAA-ATGAGCTGATCTCAACATAAGTTTAAC 79757977 >seq2147 Length=50472720 Score = 109 bits (120), Expect = 2e-20 Identities = 101/124 (81%), Gaps = 3/124 (2%) Strand=Plus/Minus Query 5794 TGTTCCAAACTGGAACAACACTCAACCCTATCTCGGGCTATT-CTTTTGATTTATAAGGG 5852 ||| ||| ||| || ||||||| | || ||||| |||| || ||||||||||| || Sbjct 42877631 TGTCCCACCCTGCCACTACACTCAGACATAACTCGGTGTATTTCTATTGATTTATAAAGG 42877572 Query 5853 ATTTTGCCGATTT-CGGCCTATTGGTTAAAAAATGAGCTG-ATTTAACAAAAATTTAACG 5910 ||||||||||||| |||||||||| || ||||||||||| ||||| ||||||||| || Sbjct 42877571 ATTTTGCCGATTTCCGGCCTATTGATTTCAAAATGAGCTGAATTTAGGAAAAATTTATCG 42877512 Query 5911 CGAA 5914 |||| Sbjct 42877511 CGAA 42877508 >seq2902 Length=1361745 Score = 98.7 bits (108), Expect = 4e-17 Identities = 79/94 (84%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 5599 TTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGT 5658 ||||| | | ||||||||||||||||||||| |||||| | |||||| ||||||| || Sbjct 97462 TTCTCCCGCCTTTCGCCGGCTTTCCCCGTCAAACTCTAAGTGGGGGGCACCCTTTACAGT 97403 Query 5659 TCCGATTTAGTGCTTTAC-GGCACCTCGACCCCA 5691 ||| ||||| |||||||| |||||||| ||||| Sbjct 97402 TCCTATTTATTGCTTTACTGGCACCTCTTCCCCA 97369 >seq2320 Length=142054208 Score = 93.3 bits (102), Expect = 2e-15 Identities = 161/231 (70%), Gaps = 5/231 (2%) Strand=Plus/Minus Query 5488 ACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGG--TGTGGTGGTTACGCGCAGCGTGAC 5545 |||| |||||| | ||||||| ||| | | || |||| || |||| ||||| Sbjct 20338247 ACGCCCCCTGTGGAGGCGCATC--GCGTAACTGTCTTGAGGTGATTTTACGCAACGTGAT 20338190 Query 5546 CGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGC 5605 |||||| || ||| | ||| | | ||||| | |||| |||||| || | ||| Sbjct 20338189 GGCTACAGCTGATAGCACACTATT-CTGGTACCTTTTGGATTCTACCCTTCATTACCCGC 20338131 Query 5606 CACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGATT 5665 |||| | ||||||||||||| ||| |||||||| |||||||||||| | ||| | | Sbjct 20338130 CACGATGATTGGCTTTCCCCGTCCAGCACTAAATCGTGGGCTCCCTTTAAGCCTCCCAAT 20338071 Query 5666 TAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTTGGGTGATGGTTC 5716 |||||||| | |||| || || | ||||||| ||||||| ||| Sbjct 20338070 TAGTGCTTAAAGGCATTGCGGTCCTCGCAGGCTTGATTATGGTGATGATTC 20338020 >seq2189 Length=10842 Score = 87.8 bits (96), Expect = 7e-14 Identities = 77/95 (81%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 5514 GCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCGCTACACTTGCCAGCGCCCTAGCGCCC 5573 ||| | |||||| ||||||||||||||||||| || ||||| |||| || || ||| Sbjct 9411 GCGTCAGGTGTGTTGGTTACGCGCAGCGTGACTCTTAAACTTGTCAGCTCCTAAGAACCC 9352 Query 5574 GCT-CCTTTCGCTTTCTTCCCTTCCTTTCTCGCCA 5607 ||| |||||| ||||||| |||||||||||| || Sbjct 9351 GCTCCCTTTCACTTTCTTATCTTCCTTTCTCGACA 9317 >seq1820 Length=98464013 Score = 78.8 bits (86), Expect = 4e-11 Identities = 102/139 (73%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 5757 TTGACGTTGGAGTCCACGTTCTTTAATAGTGGA-CTCTTGTTCCAAACTGGAACAACACT 5815 |||||| |||| ||||| ||| ||||||| | || | | || ||||| |||| Sbjct 96434016 TTGACGGTGGACTCCACACTCTGCAATAGTGCCTCCCTGGGTGTG--CTTGAACACCACT 96434073 Query 5816 CAACCCTATCTCGGGCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCCTATTG 5875 | ||||| ||| || |||||| | ||||||| ||| | | |||||||| | |||||| Sbjct 96434074 CCACCCTTTCTAGGCCTATTCATGTGATTTAGCCCGGAATCTTCCGATTTCAGTCTATTG 96434133 Query 5876 GTTAAAAAATGAGCTGATT 5894 || | ||||||||||||| Sbjct 96434134 GTCCAGAAATGAGCTGATT 96434152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20383941998020