Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_006148.1 Length=4432 Score E Sequences producing significant alignments: (Bits) Value seq7012 120 9e-24 seq5024 111 4e-21 >seq7012 Length=11079692 Score = 120 bits (132), Expect = 9e-24 Identities = 141/187 (75%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 1269 AAGAACTTTGGCAAGAGAAACACCATCTGGCTGTATGGTCCAGCTACTACCGGCAAAACC 1328 ||||| || || ||| | || ||||||||||||| ||| || ||||| || ||||| ||| Sbjct 2895028 AAGAAATTCGGGAAGCGGAATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACC 2895087 Query 1329 ATCATCGCTCAAGCTATTGCACATGCTGTTAAACTGTT--TGCTGGTGTTAATTGGACTA 1386 | ||| || |||| ||||| ||||| | | || || ||| | || || ||||||| Sbjct 2895088 AACATTGCGGAAGCCATTGCCCATGCAG-TGCCCTTTTACGGCT-GCGTGAACTGGACTA 2895145 Query 1387 ATGAAAACTTTCCCTTCTGTAACTGTCCAGGGAAACTGCTTATCTGGTGGGAGGAGGGCA 1446 |||| |||||||| ||| | || | | ||| || | ||||||||||||||||||| Sbjct 2895146 ATGAGAACTTTCCGTTCAACGATTGCCTCGACAAAATGGTGATCTGGTGGGAGGAGGGCA 2895205 Query 1447 AGATGAC 1453 ||||||| Sbjct 2895206 AGATGAC 2895212 >seq5024 Length=16258934 Score = 111 bits (122), Expect = 4e-21 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 1269 AAGAACTTTGGCAAGAGAAACACCATCTGGCTGTATGGTCCAGCTACTACCGGCAAAACC 1328 || || || || ||| | |||||||||||||||| ||| || || | |||||||| ||| Sbjct 1692750 AAAAAGTTCGGTAAGCGGAACACCATCTGGCTGTTTGGGCCTGCCAGCACCGGCAAGACC 1692691 Query 1329 ATCATCGCTCAAGCTATTGCACATGCTGTTAAACTGTTTGCTGGTGTTAATTGGACTAAT 1388 | |||||| |||| ||||| ||||| || | | | |||| || ||||| ||| Sbjct 1692690 AACATCGCGGAAGCCATTGCCCATGCGGTGCCCTTCTACGGCTGTGTGAACTGGACCAAT 1692631 Query 1389 GAAAACTTTCCCTTCTGTAACTGTCCAGGGAAACTGCTTATCTGGTGGGAGGAGGGCAAG 1448 || |||||||| ||| | || | || || | ||||||||||||||||||||| Sbjct 1692630 GAGAACTTTCCGTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAG 1692571 Query 1449 ATGACAAACAAAATGGTGGAGACGGCTAA 1477 ||||| ||| | |||||| ||| || Sbjct 1692570 ATGACCGCCAAGGTCGTGGAGTTGGCCAA 1692542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14068640518465