Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_016744.1 Length=5065 Score E Sequences producing significant alignments: (Bits) Value seq5024 78.8 3e-11 >seq5024 Length=16258934 Score = 78.8 bits (86), Expect = 3e-11 Identities = 151/217 (70%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 1184 TAAGCGGCGAGCCTTATGGCTCTGGGGCCCTGCCAGTACCGGCAAAACTGTTATTGCCGC 1243 ||||||| || | ||||| | || |||||||| |||||||| || || || | Sbjct 1692739 TAAGCGGAACACCATCTGGCTGTTTGGGCCTGCCAGCACCGGCAAGACCAACATCGCGGA 1692680 Query 1244 GGCTATAGCCGC-GCAGGCCCCTAGCTACGGCTGTGTAAACTGGACTAATGCCAACTTTC 1302 || || ||| || | |||| |||||||||||| |||||||| |||| ||||||| Sbjct 1692679 AGCCATTGCCCATGCGGTGCCCTT-CTACGGCTGTGTGAACTGGACCAATGAGAACTTTC 1692621 Query 1303 CTTTTAATGACTGCCACTGTCAACCGCTAGTG---TGGTGGGAGGAAGGCCGAATGACTG 1359 | || || || ||| | | ||| | | ||| ||||||||||| ||| ||||| | Sbjct 1692620 CGTTCAACGATTGCGTC-GACAA--GATGGTGATCTGGTGGGAGGAGGGCAAGATGACCG 1692564 Query 1360 AAAACATTGTGGAAGTGGCCAAAGCAATTTTGGGAGG 1396 || | ||||| ||||||| || || |||| || Sbjct 1692563 CCAAGGTCGTGGAGTTGGCCAAGGCCATCCTGGGCGG 1692527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16093987220350