Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_025965.1 Length=5426 Score E Sequences producing significant alignments: (Bits) Value seq7012 114 4e-22 seq5024 95.1 4e-16 >seq7012 Length=11079692 Score = 114 bits (126), Expect = 4e-22 Identities = 167/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1153 GAAGAGGAGAGCCCTCTGGCTGTTCGGTCCCGCTAACACTGGCAAGACGCTCTTAGCCGG 1212 |||| ||| || |||||||||| || || |||| ||| |||||||| | | || | Sbjct 2895039 GAAGCGGAATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACCAACATTGCGGA 2895098 Query 1213 TGCCTTCGCCAAACTAGCTCCCTGCTTCGGCTGCGTGAATTGGAACAATGAGAATTTCCC 1272 ||| | ||| | || |||| | |||||||||||| |||| |||||||| || || Sbjct 2895099 AGCCATTGCCCATGCAGTGCCCTTTTACGGCTGCGTGAACTGGACTAATGAGAACTTTCC 2895158 Query 1273 GTTCAGTGACTGTGCCTC--TCAATCCCTGATTTGGTGGGAAGAAGGGAAGATGTCTGAG 1330 ||||| || |||||| || |||| |||||||| || || |||||| ||| Sbjct 2895159 GTTCAACGA--TTGCCTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAGATGACTGCC 2895216 Query 1331 AAGTTTGTAGAGGCCGCTAAGGCCATCCTTGGTGGCAGCGAGATAAGGATCGAC 1384 ||| | |||||| | || || |||||||| || |||||| || || | ||||| Sbjct 2895217 AAGGTCGTAGAGTCAGCCAACGCCATCCTGGGCGGCAGCAAGGTACGTGTCGAC 2895270 >seq5024 Length=16258934 Score = 95.1 bits (104), Expect = 4e-16 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 1164 CCCTCTGGCTGTTCGGTCCCGCTAACACTGGCAAGACGCTCTTAGCCGGTGCCTTCGCCA 1223 || |||||||||| || || || | ||| |||||||| | | || | ||| | ||| Sbjct 1692728 CCATCTGGCTGTTTGGGCCTGCCAGCACCGGCAAGACCAACATCGCGGAAGCCATTGCCC 1692669 Query 1224 AACTAGCTCCCTGCTTCGGCTGCGTGAATTGGAACAATGAGAATTTCCCGTTCAGTGACT 1283 | | |||| || |||||| ||||| |||| ||||||||| || ||||||| || | Sbjct 1692668 ATGCGGTGCCCTTCTACGGCTGTGTGAACTGGACCAATGAGAACTTTCCGTTCAACGATT 1692609 Query 1284 GTGCCTCTCAATCCCTGATTTGGTGGGAAGAAGGGAAGATGTCTGAGAAGTTTGTAGAGG 1343 | | | | |||| |||||||| || || |||||| | | ||| | || ||| Sbjct 1692608 GCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACCGCCAAGGTCGTGGAGT 1692549 Query 1344 CCGCTAAGGCCATCCTTGGTGGCAGCGAGATA 1375 || ||||||||||| || |||||| || || Sbjct 1692548 TGGCCAAGGCCATCCTGGGCGGCAGCAAGGTA 1692517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17249042764395