Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= NC_001829.1 Length=4767 Score E Sequences producing significant alignments: (Bits) Value seq1 809 0.0 >seq1 Length=126035930 Score = 809 bits (896), Expect = 0.0 Identities = 689/844 (82%), Gaps = 13/844 (2%) Strand=Plus/Minus Query 280 TTTGCGACACCATGTGGTCAGGA-GGGTATATAACCGCGAGTGAGCCAGCGAGGAGCTCC 338 |||||||||||| |||||||||| ||||||| || ||| ||||||| || || |||||| Sbjct 79119851 TTTGCGACACCACGTGGTCAGGAGGGGTATAAAAGCGCCAGTGAGCATGC-AGCAGCTCC 79119793 Query 339 ATTTTGCCCGCGAA------TTTTGAAC-GAGCAGCAGCC---ATGCCGGGGTTCTACGA 388 ||| | ||| ||| | || || || | |||| |||| ||| || ||||| Sbjct 79119792 ATTCTTTCCGTGAAGCACGTGTGTGTACATAGGA-AAGCCATTATGCTGGGATTTTACGA 79119734 Query 389 GATCGTGCTGAAGGTGCCCAGCGACCTGGACGAGCACCTGCCCGGCATTTCTGACTCTTT 448 ||| ||| ||||||| |||||||||||||| |||||||| ||| ||||||||||| || Sbjct 79119733 GATTGTGGTGAAGGTTCCCAGCGACCTGGATGAGCACCTACCCAATATTTCTGACTCCTT 79119674 Query 449 TGTGAGCTGGGTGGCCGAGAAGGAATGGGAGCTGCCGCCGGATTCTGACATGGACTTGAA 508 ||| | ||||||| | || ||||||||||| |||||||| ||||||||||||||| | || Sbjct 79119673 TGTAAACTGGGTGTCAGAAAAGGAATGGGAACTGCCGCCAGATTCTGACATGGACATAAA 79119614 Query 509 TCTGATTGAGCAGGCACCCCTGACCGTGGCCGAAAAGCTGCAACGCGAGTTCCTGGTCGA 568 |||||| || ||| | || |||||| ||||| | ||||| || ||| | || ||| || Sbjct 79119613 TCTGATAGAACAGACGCCGCTGACCATGGCCAAGAAGCTCCAGCGCCACTTTCTGACGGA 79119554 Query 569 GTGGCGCCGCGTGAGTAAGGCCCCGGAGGCCCTCTTCTTTGTCCAGTTCGAGAAGGGGGA 628 |||| | ||||| |||||||||||||||||||| |||||||| || || |||||||| Sbjct 79119553 GTGGAGGTCGGTGAGCAAGGCCCCGGAGGCCCTCTTTTTTGTCCAATTTGAAAAGGGGGA 79119494 Query 629 CAGCTACTTCCACCTGCACATCCTGGTGGAGACCGTGGGCGTCAAATCCATGGTGGTGGG 688 ||||||||||||||||||||||||||| ||| |||| | ||| |||||| |||| Sbjct 79119493 GTCCTACTTCCACCTGCACATCCTGGTGGAAACCACGGGCATGAAAAGCATGGTTTTGGG 79119434 Query 689 CCGCTACGTGAGCCAGATTAAAGAGAAGCTGGTGACCCGCATCTACCGCGGGGTCGAGCC 748 ||| || | ||| ||| |||| ||||| | |||||| ||||||||| |||| || Sbjct 79119433 CCGATATTTAGCCCAAATTCGTCAGAAACTGGTTAACCGCATTTACCGCGGGATCGAACC 79119374 Query 749 GCAGCTTCCGAACTGGTTCGCGGTGACCAAGACGCGTAATGGCGCCGGAGGCGGGAACAA 808 | | || |||||||||||||| || || |||| |||||||||||| | |||||||| Sbjct 79119373 GACCATGCCAAACTGGTTCGCGGTCACTAAAACGCATAATGGCGCCGGTTGGGGGAACAA 79119314 Query 809 GGTGGTGGACGACTGCTACATCCCCAACTACCTGCTCCCCAAGACCCAGCCCGAGCTCCA 868 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 79119313 GGTGGTGGACGATTGCTACATCCCCAACTACCTGCTCCCCAAAACCCAGCCCGAGCTCCA 79119254 Query 869 GTGGGCGTGGACTAACATGGACCAGTATATAAGCGCCTGTTTGAATCTCGCGGAGCGTAA 928 ||||| ||||||||||||||| |||||||||||||| |||||||| || || |||| || Sbjct 79119253 GTGGGAGTGGACTAACATGGAGCAGTATATAAGCGCGTGTTTGAACCTGGCAGAGCACAA 79119194 Query 929 ACGGCTGGTGGCGCAGCATCTGACGCACGTGTCGCAGACGCAGGAGCAGAACAAGGAAAA 988 | |||| ||||| |||||| |||| ||||| ||||||||||||||||||| || || Sbjct 79119193 ATGGCTTGTGGCACAGCATTTGACACACGTCAGCCAGACGCAGGAGCAGAACAGAGAGAA 79119134 Query 989 CCAGAACCCCAATTCTGACGCGCCGGTCATCAGGTCAAAAACCTCCGCCAGGTACATGGA 1048 ||||| |||||||||||||||||||| |||||||||||||| ||||| | |||||||| Sbjct 79119133 TCAGAATCCCAATTCTGACGCGCCGGTAATCAGGTCAAAAACTTCCGCTGGCTACATGGA 79119074 Query 1049 GCTGGTCGGGTGGCTGGTGGACCGCGGGATCACGTCAGAAAAGCAATGGATCCAGGAGGA 1108 |||||| |||||||||||||| || | || | ||||||||||||||||||||||||||| Sbjct 79119073 GCTGGTGGGGTGGCTGGTGGAGTGCAGAATTAAGTCAGAAAAGCAATGGATCCAGGAGGA 79119014 Query 1109 CCAG 1112 |||| Sbjct 79119013 CCAG 79119010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15142068097520