Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq5349 118 4e-23 seq4238 113 2e-21 >seq5349 Length=12438654 Score = 118 bits (130), Expect = 4e-23 Identities = 67/68 (99%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 2167 TGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATT 2226 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8854979 TGACTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATT 8855038 Query 2227 TAATGTGA 2234 |||||||| Sbjct 8855039 TAATGTGA 8855046 >seq4238 Length=15470603 Score = 113 bits (124), Expect = 2e-21 Identities = 79/90 (88%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 3246 GGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTT 3305 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12676194 GGAGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCAGGC 12676135 Query 3306 CCTGAGCTTAATGCTTGGGAGCGTGCTGGT 3335 || | | | |||||||||||||||||| Sbjct 12676134 CCAGGCCGCAGAGCTTGGGAGCGTGCTGGT 12676105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17120742071660