Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_001829.1 Length=4767 Score E Sequences producing significant alignments: (Bits) Value seq4127 702 0.0 >seq4127 Length=8380095 Score = 702 bits (778), Expect = 0.0 Identities = 502/573 (88%), Gaps = 3/573 (1%) Strand=Plus/Minus Query 259 CACGTG-GTCCGTTTGCGACAGTTTGCGACACCATGTGGTCAGGAG-GGTATATAACCGC 316 |||||| || | |||||||||||||||||||||| ||||| | || ||||||||| | | Sbjct 2546493 CACGTGAGTGCTTTTGCGACAGTTTGCGACACCACGTGGTAACAAGTGGTATATAAGCCC 2546434 Query 317 GAGTGAGCCAGCGAGGAGCTCCATTTTGCCCGCGAATTTTGAACGAGCAGCAGCCATGCC 376 |||||||| || |||| |||||||||| |||| | ||||||||||| ||||||||||| Sbjct 2546433 GAGTGAGCACGC-AGGATCTCCATTTTGAGCGCGGAATTTGAACGAGCCGCAGCCATGCC 2546375 Query 377 GGGGTTCTACGAGATCGTGCTGAAGGTGCCCAGCGACCTGGACGAGCACCTGCCCGGCAT 436 ||| ||||||||||| ||| | |||||||| ||||||||||||||||||||||| || || Sbjct 2546374 GGGCTTCTACGAGATTGTGATCAAGGTGCCGAGCGACCTGGACGAGCACCTGCCGGGGAT 2546315 Query 437 TTCTGACTCTTTTGTGAGCTGGGTGGCCGAGAAGGAATGGGAGCTGCCGCCGGATTCTGA 496 ||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||| Sbjct 2546314 TTCTGACAGCTTTGTGAACTGGGTGGCCGAGAAGGAATGGGAGTTGCCCCCGGATTCTGA 2546255 Query 497 CATGGACTTGAATCTGATTGAGCAGGCACCCCTGACCGTGGCCGAAAAGCTGCAACGCGA 556 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2546254 CATGGATCAGAATCTGATTGAGCAGGCACCCCTGACCGTGGCCGAGAAGCTGCAACGCGA 2546195 Query 557 GTTCCTGGTCGAGTGGCGCCGCGTGAGTAAGGCCCCGGAGGCCCTCTTCTTTGTCCAGTT 616 |||||||| || |||||||| ||||||||||||| |||||||||||| |||||||| || Sbjct 2546194 CTTCCTGGTGGAATGGCGCCGTGTGAGTAAGGCCCTGGAGGCCCTCTTTTTTGTCCAATT 2546135 Query 617 CGAGAAGGGGGACAGCTACTTCCACCTGCACATCCTGGTGGAGACCGTGGGCGTCAAATC 676 |||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2546134 CGAGAAGGGGGAGAGCTACTTCCACCTGCACATCCTGGTGGAGACCACCGGGGTCAAATC 2546075 Query 677 CATGGTGGTGGGCCGCTACGTGAGCCAGATTAAAGAGAAGCTGGTGACCCGCATCTACCG 736 ||||||| ||||||| | |||| |||||| || |||||||| ||||| ||||| Sbjct 2546074 CATGGTGCTGGGCCGATTTCTGAGTCAGATTCGCGACAAGCTGGTTCAGCGCATGTACCG 2546015 Query 737 CGGGGTCGAGCCGCAGCTTCCGAACTGGTTCGCGGTGACCAAGACGCGTAATGGCGCCGG 796 |||| |||||||| | ||||||||||||||||| || |||||||||||||||||||| Sbjct 2546014 CGGGATCGAGCCGACCATGCCGAACTGGTTCGCGGTCACAAAGACGCGTAATGGCGCCGG 2545955 Query 797 AGGCGGGAACAAGGTGGTGGACGACTGCTACAT 829 ||||||||||||||||||||||||||||||||| Sbjct 2545954 AGGCGGGAACAAGGTGGTGGACGACTGCTACAT 2545922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15140226403120