Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq4127 832 0.0 >seq4127 Length=8380095 Score = 832 bits (922), Expect = 0.0 Identities = 550/607 (91%), Gaps = 3/607 (0%) Strand=Plus/Minus Query 189 ACGTCATAGGGG-AGT--GGTCCTGTATTAGCTGTCACGTGAGTGCTTTTGCGACATTTT 245 ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||| Sbjct 2546528 ACGTCATAGGGTTAGGCAGGTCCTGTATTAGCTGTCACGTGAGTGCTTTTGCGACAGTTT 2546469 Query 246 GCGACACCACGTGGCCATTTAGGGTATATATGGCCGAGTGAGCGAGCAGGATCTCCATTT 305 |||||||||||||| | |||||||| | |||||||||| ||||||||||||||| Sbjct 2546468 GCGACACCACGTGGTAACAAGTGGTATATAAGCCCGAGTGAGCACGCAGGATCTCCATTT 2546409 Query 306 TGACCGCGAAATTTGAACGAGCAGCAGCCATGCCGGGCTTCTACGAGATCGTGATCAAGG 365 ||| |||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct 2546408 TGAGCGCGGAATTTGAACGAGCCGCAGCCATGCCGGGCTTCTACGAGATTGTGATCAAGG 2546349 Query 366 TGCCGAGCGACCTGGACGAGCACCTGCCGGGCATTTCTGACTCGTTTGTGAGCTGGGTGG 425 ||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| Sbjct 2546348 TGCCGAGCGACCTGGACGAGCACCTGCCGGGGATTTCTGACAGCTTTGTGAACTGGGTGG 2546289 Query 426 CCGAGAAGGAATGGGAGCTGCCCCCGGATTCTGACATGGATCTGAATCTGATTGAGCAGG 485 ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 2546288 CCGAGAAGGAATGGGAGTTGCCCCCGGATTCTGACATGGATCAGAATCTGATTGAGCAGG 2546229 Query 486 CACCCCTGACCGTGGCCGAGAAGCTGCAGCGCGACTTCCTGGTCCAATGGCGCCGCGTGA 545 |||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||| Sbjct 2546228 CACCCCTGACCGTGGCCGAGAAGCTGCAACGCGACTTCCTGGTGGAATGGCGCCGTGTGA 2546169 Query 546 GTAAGGCCCCGGAGGCCCTCTTCTTTGTTCAGTTCGAGAAGGGCGAGTCCTACTTCCACC 605 ||||||||| |||||||||||| ||||| || ||||||||||| ||| ||||||||||| Sbjct 2546168 GTAAGGCCCTGGAGGCCCTCTTTTTTGTCCAATTCGAGAAGGGGGAGAGCTACTTCCACC 2546109 Query 606 TCCATATTCTGGTGGAGACCACGGGGGTCAAATCCATGGTGCTGGGCCGCTTCCTGAGTC 665 | || || |||||||||||||| |||||||||||||||||||||||||| || ||||||| Sbjct 2546108 TGCACATCCTGGTGGAGACCACCGGGGTCAAATCCATGGTGCTGGGCCGATTTCTGAGTC 2546049 Query 666 AGATTAGGGACAAGCTGGTGCAGACCATCTACCGCGGGATCGAGCCGACCCTGCCCAACT 725 ||||| | ||||||||||| ||| ||| ||||||||||||||||||||| |||| |||| Sbjct 2546048 AGATTCGCGACAAGCTGGTTCAGCGCATGTACCGCGGGATCGAGCCGACCATGCCGAACT 2545989 Query 726 GGTTCGCGGTGACCAAGACGCGTAATGGCGCCGGAGGGGGGAACAAGGTGGTGGACGAGT 785 |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 2545988 GGTTCGCGGTCACAAAGACGCGTAATGGCGCCGGAGGCGGGAACAAGGTGGTGGACGACT 2545929 Query 786 GCTACAT 792 ||||||| Sbjct 2545928 GCTACAT 2545922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14983448910780