Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_005889.1 Length=4693 Score E Sequences producing significant alignments: (Bits) Value seq4127 111 5e-21 >seq4127 Length=8380095 Score = 111 bits (122), Expect = 5e-21 Identities = 209/307 (68%), Gaps = 3/307 (1%) Strand=Plus/Minus Query 411 TGGAAGAGCACCTGCCTGGAATTTCTGACAACTTTGTAGACTGGGTAACTGGTCAAATTT 470 |||| ||||||||||| || |||||||||| |||||| ||||||| | | | | Sbjct 2546336 TGGACGAGCACCTGCCGGGGATTTCTGACAGCTTTGTGAACTGGGTGGCCGAGAAGGAAT 2546277 Query 471 GGGAGCTGCCTCCCGAGTCAGATTTGAATTTGACTCTGATTGAGCAGCCTCAGCTGACGG 530 ||||| |||| || || || || || || || ||||||||||||| | | ||||| | Sbjct 2546276 GGGAGTTGCCCCCGGATTCTGACATGGATCAGAATCTGATTGAGCAGGCACCCCTGACCG 2546217 Query 531 TGGCTGACAGAATTCGCCGCGTGTTCCTGTACGAGTGGAACAAATTTTCCAAG---CAGG 587 |||| || | | | |||| |||||| || ||| | | ||| | || Sbjct 2546216 TGGCCGAGAAGCTGCAACGCGACTTCCTGGTGGAATGGCGCCGTGTGAGTAAGGCCCTGG 2546157 Query 588 AGAGCAAATTCTTTGTGCAGTTTGAAAAGGGATCTGAATATTTTCATCTGCACACGCTCG 647 || | || ||||| || || || ||||| || || || ||||||| || | Sbjct 2546156 AGGCCCTCTTTTTTGTCCAATTCGAGAAGGGGGAGAGCTACTTCCACCTGCACATCCTGG 2546097 Query 648 TGGAGACCTCCGGCATCTCTTCTATGGTCCTTGGCCGCTACGTGAGTCAGATTCGCGCCC 707 |||||||| |||| || || ||||| || ||||| | ||||||||||||||| | Sbjct 2546096 TGGAGACCACCGGGGTCAAATCCATGGTGCTGGGCCGATTTCTGAGTCAGATTCGCGACA 2546037 Query 708 AGCTGGT 714 ||||||| Sbjct 2546036 AGCTGGT 2546030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14903460394280