Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_006260.1 Length=4721 Score E Sequences producing significant alignments: (Bits) Value seq4127 809 0.0 >seq4127 Length=8380095 Score = 809 bits (896), Expect = 0.0 Identities = 545/607 (90%), Gaps = 3/607 (0%) Strand=Plus/Minus Query 188 ACGTCATAGGGG-AGT--GGTCCTGTATTAGCTGTCACGTGAGTGCTTTTGCGACATTTT 244 ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||| Sbjct 2546528 ACGTCATAGGGTTAGGCAGGTCCTGTATTAGCTGTCACGTGAGTGCTTTTGCGACAGTTT 2546469 Query 245 GCGACACCACGTGGCCATTTGAGGTATATATGGCCGAGTGAGCGAGCAGGATCTCCATTT 304 |||||||||||||| | | |||||||| | |||||||||| ||||||||||||||| Sbjct 2546468 GCGACACCACGTGGTAACAAGTGGTATATAAGCCCGAGTGAGCACGCAGGATCTCCATTT 2546409 Query 305 TGACCGCGAAATTTGAACGAGCAGCAGCCATGCCGGGTTTCTACGAGATCGTGATCAAGG 364 ||| |||| ||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct 2546408 TGAGCGCGGAATTTGAACGAGCCGCAGCCATGCCGGGCTTCTACGAGATTGTGATCAAGG 2546349 Query 365 TGCCGAGCGACCTGGACGAGCACCTGCCGGGCATTTCTGACTCGTTTGTGAACTGGGTGG 424 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 2546348 TGCCGAGCGACCTGGACGAGCACCTGCCGGGGATTTCTGACAGCTTTGTGAACTGGGTGG 2546289 Query 425 CCGAGAAGGAATGGGAGCTGCCCCCGGATTCTGACATGGATCTGAATCTGATCGAGCAGG 484 ||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| Sbjct 2546288 CCGAGAAGGAATGGGAGTTGCCCCCGGATTCTGACATGGATCAGAATCTGATTGAGCAGG 2546229 Query 485 CACCCCTGACCGTGGCCGAGAAGCTGCAGCGCGACTTCCTGGTCCAATGGCGCCGCGTGA 544 |||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||| Sbjct 2546228 CACCCCTGACCGTGGCCGAGAAGCTGCAACGCGACTTCCTGGTGGAATGGCGCCGTGTGA 2546169 Query 545 GTAAGGCCCCGGAGGCCCTGTTCTTTGTTCAGTTCGAGAAGGGCGAGAGCTACTTCCACC 604 ||||||||| ||||||||| || ||||| || ||||||||||| |||||||||||||||| Sbjct 2546168 GTAAGGCCCTGGAGGCCCTCTTTTTTGTCCAATTCGAGAAGGGGGAGAGCTACTTCCACC 2546109 Query 605 TTCACGTTCTGGTGGAGACCACGGGGGTCAAGTCCATGGTGCTAGGCCGCTTCCTGAGTC 664 | ||| | |||||||||||||| |||||||| ||||||||||| ||||| || ||||||| Sbjct 2546108 TGCACATCCTGGTGGAGACCACCGGGGTCAAATCCATGGTGCTGGGCCGATTTCTGAGTC 2546049 Query 665 AGATTCGGGAGAAGCTGGTCCAGACCATCTACCGCGGGGTCGAGCCCACGCTGCCCAACT 724 ||||||| || |||||||| ||| ||| ||||||||| ||||||| || |||| |||| Sbjct 2546048 AGATTCGCGACAAGCTGGTTCAGCGCATGTACCGCGGGATCGAGCCGACCATGCCGAACT 2545989 Query 725 GGTTCGCGGTGACCAAGACGCGTAATGGCGCCGGCGGGGGGAACAAGGTGGTGGACGAGT 784 |||||||||| || |||||||||||||||||||| || |||||||||||||||||||| | Sbjct 2545988 GGTTCGCGGTCACAAAGACGCGTAATGGCGCCGGAGGCGGGAACAAGGTGGTGGACGACT 2545929 Query 785 GCTACAT 791 ||||||| Sbjct 2545928 GCTACAT 2545922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14993047532760