Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_006261.1
Length=4393
Score E
Sequences producing significant alignments: (Bits) Value
seq4127 780 0.0
>seq4127
Length=8380095
Score = 780 bits (864), Expect = 0.0
Identities = 547/613 (89%), Gaps = 9/613 (1%)
Strand=Plus/Minus
Query 81 ACGTCATAGGGG-AGT--GGTCCTGTATTAGCTGTCACGTGAGTGCTTTTGCGGCATTTT 137
||||||||||| || ||||||||||||||||||||||||||||||||||| || |||
Sbjct 2546528 ACGTCATAGGGTTAGGCAGGTCCTGTATTAGCTGTCACGTGAGTGCTTTTGCGACAGTTT 2546469
Query 138 GCGACACCACGTGGCCATTTGAGGTATATATGGCCGAGTGAGCGAGCAGGATCTCCATTT 197
|||||||||||||| | | |||||||| | |||||||||| |||||||||||||||
Sbjct 2546468 GCGACACCACGTGGTAACAAGTGGTATATAAGCCCGAGTGAGCACGCAGGATCTCCATTT 2546409
Query 198 TGACCGCGAAATTTGAACGAGCAGCAGCCATGCCGGGCTTCTACGAGATCGTGATCAAGG 257
||| |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 2546408 TGAGCGCGGAATTTGAACGAGCCGCAGCCATGCCGGGCTTCTACGAGATTGTGATCAAGG 2546349
Query 258 TGCCGAGCGACCTGGACGAGCACCTGCCGGGCATTTCTGACTCGTTTGTGAACTGGGTGG 317
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct 2546348 TGCCGAGCGACCTGGACGAGCACCTGCCGGGGATTTCTGACAGCTTTGTGAACTGGGTGG 2546289
Query 318 CCGAGAAGGAATGGGAGCTGCCCCCGGATTCTGACATGGATCGGAATCTGATCGAGCAGG 377
||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||
Sbjct 2546288 CCGAGAAGGAATGGGAGTTGCCCCCGGATTCTGACATGGATCAGAATCTGATTGAGCAGG 2546229
Query 378 CACCCCTGACCGTGGCCGAGAAGCTGCAGCGCGACTTCCTGGTCCAATGGCGCCGCGTGA 437
|||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct 2546228 CACCCCTGACCGTGGCCGAGAAGCTGCAACGCGACTTCCTGGTGGAATGGCGCCGTGTGA 2546169
Query 438 GTAAGGCCCCGGAGGCCCTCTTCTTTGTTCAGTTCGAGAAGGGCGAGAGCTACTTTCACC 497
||||||||| |||||||||||| ||||| || ||||||||||| ||||||||||| ||||
Sbjct 2546168 GTAAGGCCCTGGAGGCCCTCTTTTTTGTCCAATTCGAGAAGGGGGAGAGCTACTTCCACC 2546109
Query 498 TGCACGTTCTGGTCGAGACCACGGGGGTCAAGTCCATGGTGCTAGGCCGCTTCCTGAGTC 557
||||| | ||||| |||||||| |||||||| ||||||||||| ||||| || |||||||
Sbjct 2546108 TGCACATCCTGGTGGAGACCACCGGGGTCAAATCCATGGTGCTGGGCCGATTTCTGAGTC 2546049
Query 558 AGATTCGGGAAAAGCTTGGTCCAGACCATCTACCCGCGGGGTCGAGCCCCACCTTGCCCA 617
||||||| || |||| |||| ||| ||| || ||||||| ||||| || ||| |||| |
Sbjct 2546048 AGATTCGCGACAAGC-TGGTTCAGCGCATGTA-CCGCGGGATCGAG-CCGACCATGCCGA 2545992
Query 618 ACTGGTTCGCGGTGACCAAAGACGCGGTAATGGCGCCGGCgggggggAACAAGGTGGTGG 677
||||||||||||| | ||||||||| ||||||||||||| || ||||||||||||||||
Sbjct 2545991 ACTGGTTCGCGGTCA-CAAAGACGC-GTAATGGCGCCGG-AGGCGGGAACAAGGTGGTGG 2545935
Query 678 ACGAGTGCTACAT 690
|||| ||||||||
Sbjct 2545934 ACGACTGCTACAT 2545922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 13943598196280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |