Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_001701.1
Length=5106
Score E
Sequences producing significant alignments: (Bits) Value
seq1530899 282 1e-72
>seq1530899
Length=6551
Score = 282 bits (312), Expect = 1e-72
Identities = 336/452 (74%), Gaps = 3/452 (1%)
Strand=Plus/Plus
Query 1512 TTCAACAAAAGAAACGCCATATGGCTCTACGGACCTGCCACCACCGGGAAGACCAACATT 1571
|||||||| ||||| |||||||| ||||| ||||||| |||| || || || ||||
Sbjct 4670 TTCAACAAGAGAAATGCCATATGATTCTACCGACCTGCAACCATGGGAAAAACAAACACA 4729
Query 1572 GCAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAAC 1631
||||| | ||||||||||||||| ||||| ||||| ||||| |||||||||||| | |||
Sbjct 4730 GCAGAGGTTATTGCCCATGCTGTGCCCTTTTATGGTTGTGTGAACTGGACTAATTAAAAC 4789
Query 1632 TTTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGGGAGGAGGGAAAAATGACT 1691
||| |||||||||| ||||| || |||||| | | |||| ||||||||| |||| ||||
Sbjct 4790 TTTTCTTTTAATGACTGTGTGGACAAAATGATCTTATGGTAGGAGGAGGGTAAAAAGACT 4849
Query 1692 AATAAGGTTGTTGAATCTGCAAAAGCAATTTTGGGAGGGTCTGCTGTCCGGGTAGACCAG 1751
|| || |||| || ||| | ||| | || ||||| || |||||||| | || || ||
Sbjct 4850 AACAAAATTGTAGAGTCTACCAAACCTATGTTGGG-GGATCTGCTGTTCATGTTGATCAA 4908
Query 1752 AAATGTAAAGGATCTGTTTGTATTGAACCTACTCCTGTAATTATTACTAGTAATACTGAT 1811
|||||||||| ||||| |||||| |||||| ||| || ||||| |||||||||||
Sbjct 4909 AAATGTAAAGATTCTGTACAAATTGAAACTACTCTTGTTATCATTACAAGTAATACTGAC 4968
Query 1812 ATGTGTATGATTGTTGATGGCAACTCTACTACAATGGAACATAGAATACCATTAGAGGAG 1871
|||| | | || | ||||| ||| ||||| | ||||| | | |||| | || ||
Sbjct 4969 ATGTATGTTATAGGGGATGGTAACAGTACTAGTTTCGAACACAAACCACCACTGGAAGAA 5028
Query 1872 CGTATGTTTCAAATTGTCCTATCACATAAATTGGAG-CCTTCTTTTGGAAAAATTTCTAA 1930
| |||||| ||| | | |||| | ||| | | ||||| |||||| |||
Sbjct 5029 TGCATGTTT-TTGTTGAGATTTATAGTAAAATTGAGACATGACTTTGGTAAAATTAATAA 5087
Query 1931 AAAAGAAGTCAGAGAATTTTTCAAATGGGCCA 1962
||||| |||||||| || | ||||| ||
Sbjct 5088 GTGGGAAGTTAGAGAATTCTTTAGATGGGGCA 5119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15653691832075
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |