Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_001729.1
Length=4726
Score E
Sequences producing significant alignments: (Bits) Value
seq1892775 102 2e-18
>seq1892775
Length=1727
Score = 102 bits (112), Expect = 2e-18
Identities = 191/276 (69%), Gaps = 10/276 (4%)
Strand=Plus/Plus
Query 4039 GACGTGTACCTTCAAGGACCTATCTGGGCAAAGATTCCTCACACGGATGGACACTTTCAT 4098
||| | || ||||| || ||||| ||||| || |||||| | || |||||| | |||||
Sbjct 785 GACATTTATCTTCAGGGCCCTATTTGGGCTAAAATTCCTGATACAGATGGAAATTTTCAG 844
Query 4099 CCTTCTCCTCTGATGGGAGGCTTTGGACTGAAACATCCGCCTCCTCAAATCATGATCAAA 4158
||| ||| ||||||| ||||| || ||||| || ||| ||| | | |||
Sbjct 845 CCTCATCCAAACGTGGGAGGGTTTGGTTGTAAGCATCCACCCCCTATGATCTTTCTAAAA 904
Query 4159 AATACTCCGGTACCGGCAAATCCTCCGACGA-CTTT-CAGCCCGGCCAAGTTTGCTTCAT 4216
|||||||| |||| || | || || | | |||| ||| || | || || |
Sbjct 905 AATACTCCAATACCCACAGAACCACCTGCTAGCTTTACAGAGTCTCCTA--TTAAGTCTT 962
Query 4217 TTATCACTCAGTACTCCACTGGACAGGTCAGCGTGGAAATTGAGTGGGAGCTACAGAAA- 4275
|||||| |||||||| || ||||||| || | || ||| |||||||| ||||
Sbjct 963 TTATCAGCCAGTACTCTACGCTTCAGGTCACTGTTGGAACTGATTGGGAGCT---GAAAT 1019
Query 4276 --GAAAACAGCAAACGTTGGAATCCAGAGATTCAGT 4309
||| | |||||| | || |||||||| |||||||
Sbjct 1020 CTGAACATAGCAAAAGATGCAATCCAGAAATTCAGT 1055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14480668188575
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |