Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_001829.1 Length=4767 Score E Sequences producing significant alignments: (Bits) Value seq1530899 98.7 3e-17 >seq1530899 Length=6551 Score = 98.7 bits (108), Expect = 3e-17 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 1347 AAGAGGAACACCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAACATCGCGGAA 1406 ||||| || |||| || ||| | || || || | ||| ||||| |||| || || Sbjct 4676 AAGAGAAATGCCATATGATTCTACCGACCTGCAACCATGGGAAAAACAAACACAGCAGAG 4735 Query 1407 GCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTGAACTGGACCAATGAGAACTTTCCG 1466 | || ||||| || |||||||| || || || ||||||||||| ||| | |||||| | Sbjct 4736 GTTATTGCCCATGCTGTGCCCTTTTATGGTTGTGTGAACTGGACTAATTAAAACTTTTCT 4795 Query 1467 TTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAG 1526 || || || || || ||||| ||| | | |||| ||||||||| || | ||| ||| Sbjct 4796 TTTAATGACTGTGTGGACAAAATGATCTTATGGTAGGAGGAGGGTAAAAAGACTAACAAA 4855 Query 1527 GTCGTAGAG 1535 | |||||| Sbjct 4856 ATTGTAGAG 4864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14607231265900