Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_005889.1
Length=4693
Score E
Sequences producing significant alignments: (Bits) Value
seq1530899 125 2e-25
>seq1530899
Length=6551
Score = 125 bits (138), Expect = 2e-25
Identities = 227/337 (67%), Gaps = 1/337 (0%)
Strand=Plus/Plus
Query 1356 GACCCGCGACCACCGGAAAGACCAACATCGCGGAAGCCATCTCTCACACCGTGCCCTTTT 1415
|||| || |||| ||||| || |||| || || | || | || | ||||||||||
Sbjct 4701 GACCTGCAACCATGGGAAAAACAAACACAGCAGAGGTTATTGCCCATGCTGTGCCCTTTT 4760
Query 1416 ATGGCTGTGTGAACTGGACTAATGAGAACTTNNNNNNNNNNNNNNNNNNNGAAAAAATGT 1475
|||| |||||||||||||||||| | ||||| || ||||||
Sbjct 4761 ATGGTTGTGTGAACTGGACTAATTAAAACTTTTCTTTTAATGACTGTGTGGACAAAATGA 4820
Query 1476 TGATCTGGTGGGAGGAGGGAAAGATGACCAGCAAGGTGGTGGAACCCGCCAAGGCCATCT 1535
| | |||| ||||||||| || | ||| | ||| | || || | |||| | || |
Sbjct 4821 TCTTATGGTAGGAGGAGGGTAAAAAGACTAACAAAATTGTAGAGTCTACCAAACCTATGT 4880
Query 1536 TgggggggTCTAGAGTACGAGTGGATCAAAAATGTAAATCCTCTGTACAAGTAGACTCTA 1595
|||||| ||| || | || ||||||||||||||| ||||||||| | || |||
Sbjct 4881 TGGGGGA-TCTGCTGTTCATGTTGATCAAAAATGTAAAGATTCTGTACAAATTGAAACTA 4939
Query 1596 CCCCGGTGATTATCACCTCCAATACTAACATGTGTGTGGTGGTGGATGGGAACTCCACGA 1655
| | || || || || |||||| |||||| ||| | | |||||| ||| || |
Sbjct 4940 CTCTTGTTATCATTACAAGTAATACTGACATGTATGTTATAGGGGATGGTAACAGTACTA 4999
Query 1656 CCTTTGAACACCAGCAGCCGCTGGAAGACCGCATGTT 1692
|| |||||| | | || |||||||| |||||||
Sbjct 5000 GTTTCGAACACAAACCACCACTGGAAGAATGCATGTT 5036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14378800345850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |