Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_006147.2
Length=5132
Score E
Sequences producing significant alignments: (Bits) Value
seq1530899 284 4e-73
seq1892775 96.9 1e-16
>seq1530899
Length=6551
Score = 284 bits (314), Expect = 4e-73
Identities = 481/692 (70%), Gaps = 11/692 (2%)
Strand=Plus/Plus
Query 1204 CAACAGAGCAGCAAAGAACTATAGCAATCTGGTTGATTGGCTCATTGAGATGGGTATCAC 1263
|||||| || ||||||| || || | | || || ||||| | || | || || ||
Sbjct 4351 CAACAGGACAACAAAGAAATACAGTGAAGTTGTGGACTGGCTTGTAGAAAATGGCATTAC 4410
Query 1264 CTCTGAAAAACAGTGGCTAACTGAAAATAAAGAGAGCTACCGGAGCTTTCAGGCTACATC 1323
||| || || ||||| ||| | ||||| || || | ||| |||| | ||
Sbjct 4411 CTCGGAGCGTCAATGGCTGCTAGAAGACAAAGAATCCTTTCGCAACTTCTAGGCAAGTTC 4470
Query 1324 TTCAAACAACAGA----CAAGTAAAAGCAGCACTTGAAAATGCCCGAGCAGAAATGCTAC 1379
||||||| |||| ||||||| || |||||||| || | ||| ||||||
Sbjct 4471 ----AACAACATCTCTTCAAGCGAAAGCAGTGCTGGAAAATGCTCGCGTAGAGGTGCTAC 4526
Query 1380 TAACAAAAACTGCCACAGACTATTTGATTGGAAAAGACCCAGTTCTGGACATTACTAAAA 1439
| | ||| | || ||||| | || || ||| ||||| |||| || || |
Sbjct 4527 TGATCAAATCAGCAGAGGACTACCTCATCGGGAAACTTCCAGTAGGCGACACCACCAAGA 4586
Query 1440 ATCGGATCTATCAAATTCTGAAGTTGAATAACTATAACCCTCAATATGTAGGGAGCGTCC 1499
| ||| | |||| | | || | || | || |||||| | | ||| | |
Sbjct 4587 ACAAGATATTTCAATTCTTCCAGGTAAACAGATACGACCCTCTGATGGCTGCCAGCATTC 4646
Query 1500 TATGCG-GATGGGTGAAAAGAGAATTCAACAAAAGAAATGCCATATGGCTCTACGGACCT 1558
| || | |||||| | || |||||||||| |||||||||||||| ||||| |||||
Sbjct 4647 T-TGTGAGATGGGCTCACTGATAATTCAACAAGAGAAATGCCATATGATTCTACCGACCT 4705
Query 1559 GCGACCACCGGAAAGACCAACATAGCCGAGGCTATTGCCCATGCTGTACCCTTCTATGGC 1618
|| |||| ||||| || |||| ||| |||| ||||||||||||||| ||||| |||||
Sbjct 4706 GCAACCATGGGAAAAACAAACACAGCAGAGGTTATTGCCCATGCTGTGCCCTTTTATGGT 4765
Query 1619 TGTGTTAACTGGACTAATGAGAACTTCCCATTTAATGACTGCGTTGATAAAATGCTTATA 1678
||||| |||||||||||| | ||||| | ||||||||||| || || |||||| | ||
Sbjct 4766 TGTGTGAACTGGACTAATTAAAACTTTTCTTTTAATGACTGTGTGGACAAAATGATCTTA 4825
Query 1679 TGGTGGGAGGAGGGAAAAATGACCAATAAAGTAGTGGAATCCGCAAAAGCGATACTgggg 1738
|||| ||||||||| |||| ||| || ||| | || || || | ||| | || | |||
Sbjct 4826 TGGTAGGAGGAGGGTAAAAAGACTAACAAAATTGTAGAGTCTACCAAACCTAT-GTTGGG 4884
Query 1739 gggTCTGCTGTACGAGTTGATCAAAAGTGTAAGGGGTCTGTTTGTATTGAACCTACTCCT 1798
|| |||||||| | ||||||||||| ||||| | ||||| |||||| |||||| |
Sbjct 4885 GGATCTGCTGTTCATGTTGATCAAAAATGTAAAGATTCTGTACAAATTGAAACTACTCTT 4944
Query 1799 GTAATAATTACCAGTAATACTGATATGTGCATGATTGTGGATGGAAATTCTACTACAATG 1858
|| || ||||| ||||||||||| |||| | || | |||||| || ||||| |
Sbjct 4945 GTTATCATTACAAGTAATACTGACATGTATGTTATAGGGGATGGTAACAGTACTAGTTTC 5004
Query 1859 GAACACAGAATTCCTTTGGAGGAAAGAATGTT 1890
||||||| | || |||| ||| | |||||
Sbjct 5005 GAACACAAACCACCACTGGAAGAATGCATGTT 5036
>seq1892775
Length=1727
Score = 96.9 bits (106), Expect = 1e-16
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 4233 TGGGAGCACTACCTGGCATGGTCTGGCAGAACAGAGATATTTACCTGCAGGGTCCTATAT 4292
|||||| | |||||| || | | || |||||| ||||| || ||||| ||||| |
Sbjct 750 TGGGAGTCCAACCTGGTCAAGTTTAGATGAGCAGAGACATTTATCTTCAGGGCCCTATTT 809
Query 4293 GGGCTAAAATACCCAAAACAGATGGGAAACCCCATCCTTCTCCAAACCTGGGAGGTTTTG 4352
|||||||||| || | |||||||| || || ||| ||||||| ||||||| ||||
Sbjct 810 GGGCTAAAATTCCTGATACAGATGGAAATTTTCAGCCTCATCCAAACGTGGGAGGGTTTG 869
Query 4353 GTCTCCATAATCCACCTCCCCAGGTCTTTATTAAAAATACTCCTGTTCCTGCAGATCCTC 4412
|| | ||||||| || | ||||| | ||||||||||| | || |||| || |
Sbjct 870 GTTGTAAGCATCCACCCCCTATGATCTTTCTAAAAAATACTCCAATACCCACAGAACCAC 929
Query 4413 C 4413
|
Sbjct 930 C 930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15733951344525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |