Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_006152.1
Length=4642
Score E
Sequences producing significant alignments: (Bits) Value
seq1530899 201 3e-48
seq1519523 82.4 2e-12
>seq1530899
Length=6551
Score = 201 bits (222), Expect = 3e-48
Identities = 266/368 (72%), Gaps = 1/368 (0%)
Strand=Plus/Plus
Query 1316 TTCAACAAGAGGAACACCGTCTGGCTCTACGGACCCGCCACGACCGGCAAGACCAACATC 1375
||||||||||| || || | || ||||| |||| || || | || || || ||||
Sbjct 4670 TTCAACAAGAGAAATGCCATATGATTCTACCGACCTGCAACCATGGGAAAAACAAACACA 4729
Query 1376 GCGGAGGCCATCGCCCACACTGTGCCCTTTTACGGCTGCGTGAACTGGACCAATGAAAAC 1435
|| |||| || ||||| ||||||||||||| || || ||||||||||| ||| |||||
Sbjct 4730 GCAGAGGTTATTGCCCATGCTGTGCCCTTTTATGGTTGTGTGAACTGGACTAATTAAAAC 4789
Query 1436 TTTCCCTTTAATGACTGTGTGGACAAAATGCTCATTTGGTGGGAGGAGGGAAAGATGACC 1495
||| | |||||||||||||||||||||||| || | |||| ||||||||| || | |||
Sbjct 4790 TTTTCTTTTAATGACTGTGTGGACAAAATGATCTTATGGTAGGAGGAGGGTAAAAAGACT 4849
Query 1496 AACAAGGTGGTTGAATCCGCCAAGGCCATCCTGGGGGGCTCAAAGGTGCGGGTCGATCAG 1555
||||| | || || || |||| | || | ||||| || || | || |||||
Sbjct 4850 AACAAAATTGTAGAGTCTACCAAACCTAT-GTTGGGGGATCTGCTGTTCATGTTGATCAA 4908
Query 1556 AAATGTAAATCCTCTGTTCAAATTGATTCTACCCCTGTCATTGTAACTTCCAATACAAAC 1615
||||||||| ||||| |||||||| |||| | ||| || | || ||||| ||
Sbjct 4909 AAATGTAAAGATTCTGTACAAATTGAAACTACTCTTGTTATCATTACAAGTAATACTGAC 4968
Query 1616 ATGTGTGTGGTGGTGGATGGGAATTCCACGACCTTTGAACACCAGCAGCCGCTGGAGGAC 1675
|||| ||| | | |||||| || || | || |||||| | | || ||||| ||
Sbjct 4969 ATGTATGTTATAGGGGATGGTAACAGTACTAGTTTCGAACACAAACCACCACTGGAAGAA 5028
Query 1676 CGCATGTT 1683
|||||||
Sbjct 5029 TGCATGTT 5036
>seq1519523
Length=6189
Score = 82.4 bits (90), Expect = 2e-12
Identities = 206/305 (68%), Gaps = 12/305 (4%)
Strand=Plus/Plus
Query 3117 TCAAAATCTTCAACATTCAAGTCAAAGAGGTCACGGTG-CAGGACTCCACCACNNNNATC 3175
|||||||| ||||||| |||||||| |||||||| | | ||| | | || | ||
Sbjct 23 TCAAAATCGTCAACATCCAAGTCAAGGAGGTCACAGAGGCAGCAGGC-ACAAAGACAATT 81
Query 3176 GCCAACAACCTCACCTCCACCGTCCAAGTGTTTACGGACGACGAC-TACCAGCTGCCCTA 3234
||||||||||| || || || | || | ||| || || ||| ||||| | || |
Sbjct 82 GCCAACAACCTGACTTCTACAATACAGATCTTTGTAGATGA-GACTTACCAACAACCACA 140
Query 3235 CGTCGTCGGCAACGGGACCGAGGGATGCCTGCCGGCCTTCCCTCCGCAGGTCTTTACGCT 3294
||| | || || | || || || || ||| ||| ||||| | || |||| | |
Sbjct 141 TGTCATAGGAAATGCCACTGAAGGCTGTATGCTGGCTTTCCCAGGTGATGTTTTTATGTT 200
Query 3295 GCCGCAGTACGGTTACGCGACGCT---GAACCGCGACAACACAGAAAAT---CCCACCGA 3348
||| ||||| ||||| || || |||||| | || ||| | | | ||||| |
Sbjct 201 GCCTCAGTATGGTTATTGTACTCTACATAACCGCAATAATACAAACACTACCCCCACTGC 260
Query 3349 GAGGAGCAGCTTCTT-CTGCCTAGAGTACTTTCCCAGCAAGATGCTGAGAACGGGCAACA 3407
||| | |||| || || || || || |||||||| | ||| |||||||||| || |
Sbjct 261 AAGG-TCTGCTTTTTATTGTCTGGAATATTTTCCCAGTCAAATGTTGAGAACGGGTAATA 319
Query 3408 ACTTT 3412
|||||
Sbjct 320 ACTTT 324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14221368225275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |