Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_001401.2 Length=4679 Score E Sequences producing significant alignments: (Bits) Value seq5313 486 6e-134 >seq5313 Length=180025 Score = 486 bits (538), Expect = 6e-134 Identities = 549/731 (75%), Gaps = 12/731 (2%) Strand=Plus/Minus Query 990 TACATGGAGCTGGTCGGGTGGCTCGTGGACAAGGGGATTACCTCGGAGAAGCAGTGGATC 1049 ||||||||||||||| ||| | ||||| |||||||| ||||||||| |||||||| Sbjct 142187 TACATGGAGCTGGTCAAATGGTTGGTGGAGAAGGGGATCACCTCGGAGCGAGAGTGGATC 142128 Query 1050 CAGGAGGACCAGGCCTCATACATCTCCTTCAATGCGGCCTCCAACTCGCGGTCCCAAATC 1109 | |||||||| | || ||| |||||||||| || | || || || || || Sbjct 142127 CGCGAGGACCAAGAGTCCTACCTCTCCTTCAACTCGACGGGCACGGCGTGGGGGCAGATT 142068 Query 1110 AAGGCTGCCTTGGACAATGCGGGAAAGATTATGAGCCTGACTAAAACCGCCCCCGACTAC 1169 ||||||||| ||||||| || || || ||| ||||| ||| |||||||| Sbjct 142067 AAGGCTGCCCTGGACAACGCAGGCCGCATCATGGTGACAACTAAGTTGGCCGCCGACTAC 142008 Query 1170 CTGGTGGGCCA---GCAGCCCGTGGAGGACATTTCCAGCAATCGGATTTATAAAATTTTG 1226 || | |||| | ||||| | ||||| || | || || | || || || Sbjct 142007 CTAATCGGCCGCGTGGTGCCCG---ATGACATCACCGGAAACCGTGTCTACCGGATCTTC 141951 Query 1227 GAACTAAACGGGTACGATCCCCAATATGCGGCTTCCGTCTTTCTGG---GATGGGCCACG 1283 || || || || ||| ||||| | || || | ||||| |||| | ||| | | Sbjct 141950 GACCTGAATGGCTACTATCCCAAGTACGCCGGAA--GTCTT-CTGGTCGGCTGGTGCCGG 141894 Query 1284 AAAAAGTTCGGCAAGAGGAACACCATCTGGCTGTTTGGGCCTGCAACTACCGGGAAGACC 1343 || ||| ||||||| |||||||||||||||||||||| || || |||||||| |||||| Sbjct 141893 AAGGAGTACGGCAAGCGGAACACCATCTGGCTGTTTGGACCCGCGACTACCGGAAAGACC 141834 Query 1344 AACATCGCGGAGGCCATAGCCCACACTGTGCCCTTCTACGGGTGCGTAAACTGGACCAAT 1403 ||||||||||||||||| || || | || || |||||| | ||||| ||||||||||| Sbjct 141833 AACATCGCGGAGGCCATCGCGCATGCGGTCCCGTTCTACAGCTGCGTCAACTGGACCAAC 141774 Query 1404 GAGAACTTTCCCTTCAACGACTGTGTCGACAAGATGGTGATCTGGTGGGAGGAGGGGAAG 1463 ||||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||| Sbjct 141773 GAGAACTTTCCTTTCAATGACTGTGTGGACAAAATGGTGATCTGGTGGGAGGAGGGTAAG 141714 Query 1464 ATGACCGCCAAGGTCGTGGAGTCGGCCAAAGCCATTCTCGGAGGAAGCAAGGTGCGCGTG 1523 ||||| |||||||| || |||| || || ||||| || ||||| | |||| | || Sbjct 141713 ATGACGGCCAAGGTGGTCCAGTCTGCAAAGGCCATCCTGGGAGGCTCAATGGTGAGAGTC 141654 Query 1524 GACCAGAAATGCAAGTCCTCGGCCCAGATAGACCCGACTCCCGTGATCGTCACCTCCAAC 1583 ||||||||||| ||| ||| | ||||| |||| ||| || || ||||||||||||||| Sbjct 141653 GACCAGAAATGTAAGGCCTTGCAGCAGATTGACCAGACGCCGGTCATCGTCACCTCCAAC 141594 Query 1584 ACCAACATGTGCGCCGTGATTGACGGGAACTCAACGACCTTCGAACACCAGCAGCCGTTG 1643 ||||||||||| || || || ||||| || | || || ||||| || |||||||| || Sbjct 141593 ACCAACATGTGTGCGGTCATCGACGGAAATGCCACCACGTTCGAGCATCAGCAGCCCCTG 141534 Query 1644 CAAGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGATCATGACTTTGGGAAGGTC 1703 | || ||||||||||||||||||||||||| | || |||||||||||||||| || Sbjct 141533 GAGGATCGGATGTTCAAATTTGAACTCACCCATAGACTCAATCATGACTTTGGGAAAATC 141474 Query 1704 ACCAAGCAGGA 1714 |||| |||| Sbjct 141473 TCCAAAGAGGA 141463 Score = 131 bits (144), Expect = 5e-27 Identities = 203/289 (70%), Gaps = 1/289 (0%) Strand=Plus/Minus Query 2309 AGCGGCATAAGGACGACAGCAGGGGTCTTGTGCTTCCTGGGTACAAGTACCTCGGACCCT 2368 ||| ||| ||||| | | | || || || ||||||| |||||||| || || || | Sbjct 140814 AGCAGCACCAGGACCAGGCCCGAGGGCTCGTTGTTCCTGGTTACAAGTATCTAGGCCCTT 140755 Query 2369 TCAACGGACTCGACAAGGGAGAGCCGGTCAACGAGGCAGACGCCGCGGCCCTCGAGCACG 2428 | ||||| || |||||||| || || ||||| | || ||| || || ||| ||||| Sbjct 140754 TTAACGGTCTAGACAAGGGGGAACCCGTCAATAAAGCCAACGAGGCTGCTCTCC-GCACG 140696 Query 2429 ACAAAGCCTACGACCGGCAGCTCGACAGCGGAGACAACCCGTACCTCAAGTACAACCACG 2488 |||| || ||||| ||||||| | || || ||||| |||||||| ||||| |||| Sbjct 140695 ACAAGGCATACGAAGAGCAGCTCAAGGCAGGCGATAACCCCTACCTCAAATACAATCACG 140636 Query 2489 CCGACGCGGAGTTTCAGGAGCGCCTTAAAGAAGATACGTCTTTTGGGGGCAACCTCGGAC 2548 | ||||||||||||||| || | || ||| || | || | | ||| ||| || | Sbjct 140635 CGGACGCGGAGTTTCAGCAGAGACTCCAAGGCGACAGCTCCCTAGCGGGAAACGCCGCAA 140576 Query 2549 GAGCAGTCTTCCAGGCGAAAAAGAGGGTTCTTGAACCTCTGGGCCTGGT 2597 || | ||||||| || ||| |||| | || || || || ||||| Sbjct 140575 ACGCGCTTTTCCAGGTCAAGAAGCGGGTCTTAGAGCCCCTTGGTCTGGT 140527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14854563827820