Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq5313 194 5e-46 >seq5313 Length=180025 Score = 194 bits (214), Expect = 5e-46 Identities = 227/307 (74%), Gaps = 0/307 (0%) Strand=Plus/Minus Query 1453 TGAATAACTACAACCCTCAATACATAGGAAGTATCCTGTGCGGCTGGGTGAAGAGAGAGT 1512 ||||| |||| | || | ||| |||||| | ||| ||||||| || |||| Sbjct 141946 TGAATGGCTACTATCCCAAGTACGCCGGAAGTCTTCTGGTCGGCTGGTGCCGGAAGGAGT 141887 Query 1513 TCAACAAAAGAAACGCCATATGGCTCTACGGACCTGCCACCACCGGGAAGACCAACATTG 1572 | ||| | ||| |||| ||||| | ||||| || || ||||| ||||||||||| | Sbjct 141886 ACGGCAAGCGGAACACCATCTGGCTGTTTGGACCCGCGACTACCGGAAAGACCAACATCG 141827 Query 1573 CAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACT 1632 | || || || || ||||| || || ||||| |||| || |||||||| || ||||||| Sbjct 141826 CGGAGGCCATCGCGCATGCGGTCCCGTTCTACAGCTGCGTCAACTGGACCAACGAGAACT 141767 Query 1633 TTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGGGAGGAGGGAAAAATGACTA 1692 ||||||| ||||| ||||| || |||||| |||| |||||||||||||| || ||||| Sbjct 141766 TTCCTTTCAATGACTGTGTGGACAAAATGGTGATCTGGTGGGAGGAGGGTAAGATGACGG 141707 Query 1693 ATAAGGTTGTTGAATCTGCAAAAGCAATTTTGGGAGGGTCTGCTGTCCGGGTAGACCAGA 1752 ||||| || | |||||||| || || ||||||| || || | || ||||||| Sbjct 141706 CCAAGGTGGTCCAGTCTGCAAAGGCCATCCTGGGAGGCTCAATGGTGAGAGTCGACCAGA 141647 Query 1753 AATGTAA 1759 ||||||| Sbjct 141646 AATGTAA 141640 Score = 102 bits (112), Expect = 3e-18 Identities = 180/259 (69%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 2602 TTCCTGGCTATAAGTATCTTGGGCCTGGTAACGGCCTGGATAAAGGCCCACCTGTCAATA 2661 ||||||| || |||||||| || ||| |||||| || || || || ||| ||||||| Sbjct 140781 TTCCTGGTTACAAGTATCTAGGCCCTTTTAACGGTCTAGACAAGGGGGAACCCGTCAATA 140722 Query 2662 AGGCGGACAGCGTCGC-GCT-TGAACACGACAAGGCCTATGACCAGCAGCTTAAAGCGGG 2719 | || || || || ||| | ||||||||||| || || ||||||| || || || Sbjct 140721 AAGC---CAACGAGGCTGCTCTCCGCACGACAAGGCATACGAAGAGCAGCTCAAGGCAGG 140665 Query 2720 AGACAACCCATATATAAAATTCAATCACGCTGACCAGGACTTTATAGATAGCCTCCAAGA 2779 || ||||| || | |||| ||||||||| ||| ||| ||| | || ||||||| Sbjct 140664 CGATAACCCCTACCTCAAATACAATCACGCGGACGCGGAGTTTCAGCAGAGACTCCAAGG 140605 Query 2780 CGACCAGTCATTCGGAGGTAATCTTGGAAAGGCTGTATTTCAGGCCAAAAAACGTATCTT 2839 |||| || | | || || | ||| || | || |||| ||| || || |||| Sbjct 140604 CGACAGCTCCCTAGCGGGAAACGCCGCAAACGCGCTTTTCCAGGTCAAGAAGCGGGTCTT 140545 Query 2840 AGAGCCATTTGGCCTAGTA 2858 |||||| |||| || ||| Sbjct 140544 AGAGCCCCTTGGTCTGGTA 140526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16220390433005