Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq5313 170 6e-39 >seq5313 Length=180025 Score = 170 bits (188), Expect = 6e-39 Identities = 178/234 (76%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 1539 CCATATGGCTCTACGGACCTGCGACCACCGGAAAGACCAACATAGCCGAGGCTATTGCCC 1598 |||| ||||| | ||||| ||||| ||||||||||||||||| || ||||| || || | Sbjct 141871 CCATCTGGCTGTTTGGACCCGCGACTACCGGAAAGACCAACATCGCGGAGGCCATCGCGC 141812 Query 1599 ATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACTTCCCATTTAATGACT 1658 |||| || || ||||| |||| || |||||||| || |||||||| || || ||||||| Sbjct 141811 ATGCGGTCCCGTTCTACAGCTGCGTCAACTGGACCAACGAGAACTTTCCTTTCAATGACT 141752 Query 1659 GCGTTGATAAAATGCTTATATGGTGGGAGGAGGGAAAAATGACCAATAAAGTAGTGGAAT 1718 | || || |||||| | || |||||||||||||| || ||||| || || || | | Sbjct 141751 GTGTGGACAAAATGGTGATCTGGTGGGAGGAGGGTAAGATGACGGCCAAGGTGGTCCAGT 141692 Query 1719 CCGCAAAAGCGATACTgggggggTCTGCTGTACGAGTTGATCAAAAGTGTAAGG 1772 | ||||| || || ||||| || || || |||| || || || ||||||| Sbjct 141691 CTGCAAAGGCCATCCTGGGAGGCTCAATGGTGAGAGTCGACCAGAAATGTAAGG 141638 Score = 96.9 bits (106), Expect = 1e-16 Identities = 115/153 (75%), Gaps = 5/153 (3%) Strand=Plus/Minus Query 2613 TTCCTGGCTATAAGTATGTTGGGCCTGGTAACGGCCTTGATAAAGGGCCACCTGTCAATA 2672 ||||||| || |||||| | || ||| |||||| || || || ||| ||| ||||||| Sbjct 140781 TTCCTGGTTACAAGTATCTAGGCCCTTTTAACGGTCTAGACAAGGGGGAACCCGTCAATA 140722 Query 2673 AAGCGGACAGCGTCGC-GCT-TGAGCACGATAAAGCGTACGACCAGCAGCTCAAGGCAGG 2730 |||| || || || ||| | |||||| || || ||||| |||||||||||||||| Sbjct 140721 AAGC---CAACGAGGCTGCTCTCCGCACGACAAGGCATACGAAGAGCAGCTCAAGGCAGG 140665 Query 2731 AGACAACCCCTATATAAAATTTAAGCACGCAGA 2763 || |||||||| | |||| || ||||| || Sbjct 140664 CGATAACCCCTACCTCAAATACAATCACGCGGA 140632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16303555519035